RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SNAPC1Q16533 368 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 TSTQ16762 297 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 TMEM249Q2WGJ8 235 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZIK1Q3SY52 487 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF684Q5T5D7 378 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 LPCAT4Q643R3 524 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 LAIR2Q6ISS4 152 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 LRRN1Q6UXK5 716 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 PLEKHG7Q6ZR37 379 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF786Q8N393 782 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 OR1J2Q8NGS2 313 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 SPSB4Q96A44 273 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 EME1Q96AY2 570 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 OTULINQ96BN8 352 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 HAVCR1Q96D42 359 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 TRMT61AQ96FX7 289 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF582Q96NG8 517 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 IL4I1Q96RQ9 567 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF649Q9BS31 505 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 BDH2Q9BUT1 245 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 BARX1Q9HBU1 254 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF275Q9NSD4 429 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 FAM206AQ9NX38 181 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 SLCO1C1Q9NYB5 712 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 TREM2Q9NZC2 230 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 NKX1-2Q9UD57 310 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 LRP12Q9Y561 859 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 FBN1P35555 2871 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 IGHV3-64DA0A0J9YX35 117 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 IQCF6A8MYZ5 107 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM157AC9JC47 383 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF878C9JN71 531 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 TLX2O43763 284 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CDC14BO60729 498 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ENTPD6O75354 484 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CLIC3O95833 236 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 PNPP00491 289 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 PTHP01270 115 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 HMGN1P05114 100 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 TACSTD2P09758 323 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ANPEPP15144 967 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 FMO3P31513 532 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 RAD52P43351 418 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CX3CR1P49238 355 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 PDLIM4P50479 330 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF81P51508 661 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF121P58317 390 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ISL1P61371 349 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ELF3P78545 371 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CCL8P80075 99 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF85Q03923 595 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 GABPB1Q06547 395 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 LOXL1Q08397 574 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 RCN1Q15293 331 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZSCAN26Q16670 478 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 NKPD1Q17RQ9 610 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC35D3Q5M8T2 416 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 AVPI1Q5T686 147 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 NXNL2Q5VZ03 156 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZFP1Q6P2D0 407 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CLEC2AQ6UVW9 174 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 USP51Q70EK9 711 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ENTHD1Q8IYW4 607 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 BHLHE23Q8NDY6 225 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 OR8B12Q8NGG6 310 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 OR56B2PQ8NGI1 322 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CLDND2Q8NHS1 167 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM81AQ8TBF8 368 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ITLN1Q8WWA0 313 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 NRG4Q8WWG1 115 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM168AQ92567 244 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 APOBEC3DQ96AK3 386 aaPredicted RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 DCLRE1CQ96SD1 692 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 TEAD3Q99594 435 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 RBM4BQ9BQ04 359 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC30A2Q9BRI3 323 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 COPS4Q9BT78 406 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 KCNN2Q9H2S1 579 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF556Q9HAH1 456 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 MRM2Q9UI43 246 aaKnown RBP6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
TOPBP1-207ENST00000509162 ERICH4A6NGS2 130 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 INAFM1C9JVW0 142 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 F5H5P2 479 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 TIMM8AO60220 97 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 WBP4O75554 376 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 HLA-DPB1P04440 258 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 SBK2P0C263 348 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 RAC2P15153 192 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 FOSL1P15407 271 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC25A16P16260 332 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF823P16415 610 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 EGR1P18146 543 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM3AP98173 230 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 ROM1Q03395 351 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 MAB21L1Q13394 359 aa6.07□□□□□ -1.44
TOPBP1-207ENST00000509162 CARTPTQ16568 116 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms