RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 LINC01590Q5TEZ4 76 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 DCXRQ7Z4W1 244 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 BPIFB2Q8N4F0 458 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 LINC00471Q8N535 108 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 PROKR2Q8NFJ6 384 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 OR2T4Q8NH00 348 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 EME1Q96AY2 570 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
LMNA-222ENST00000508500 DGCR6LQ9BY27 220 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 TBC1D23Q9NUY8 699 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 PPIAL4AQ9Y536 164 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 GNGT2O14610 69 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 FAM20BO75063 409 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 FSTL3O95633 263 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 RPS2P15880 293 aaKnown RBP13.54□□□□□ -0.24
LMNA-222ENST00000508500 CA6P23280 308 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 UBA52P62987 128 aaKnown RBP13.54□□□□□ -0.24
LMNA-222ENST00000508500 ACTG1P63261 375 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 MICAQ29983 383 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 ESCO2Q56NI9 601 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 GLYATL3Q5SZD4 288 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 OR2T5Q6IEZ7 315 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 ZNF841Q6ZN19 808 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 SIGLECL1Q8N7X8 197 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 OR2T29Q8NH02 315 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 Q8TCH9 128 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 JMJD8Q96S16 334 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 NIPSNAP1Q9BPW8 284 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
LMNA-222ENST00000508500 NUP50Q9UKX7 468 aa13.54□□□□□ -0.24
LMNA-222ENST00000508500 CD300LBA8K4G0 201 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 PTBP3O95758 552 aaKnown RBP13.53□□□□□ -0.24
LMNA-222ENST00000508500 IGHV4-38-2P0DP08 117 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 SLC2A1P11166 492 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 SPI1P17947 270 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 EGR1P18146 543 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 FPR2P25090 351 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 PEX2P28328 305 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 PRKXP51817 358 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 MALLQ13021 153 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 ARMCX4Q5H9R4 360 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 ZBTB49Q6ZSB9 765 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 DOK3Q7L591 496 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 CELF2-AS1Q8N7Q2 184 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 OR5K1Q8NHB7 308 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 SLAMF6Q96DU3 332 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 NEIL1Q96FI4 390 aaPredicted RBP13.53□□□□□ -0.24
LMNA-222ENST00000508500 ZNF184Q99676 751 aaPredicted RBP13.53□□□□□ -0.24
LMNA-222ENST00000508500 UFSP2Q9NUQ7 469 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 MIOXQ9UGB7 285 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 SAMHD1Q9Y3Z3 626 aaKnown RBP13.53□□□□□ -0.24
LMNA-222ENST00000508500 MGAM2Q2M2H8 2515 aa13.53□□□□□ -0.24
LMNA-222ENST00000508500 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 ZNF593O00488 134 aaPredicted RBP13.52□□□□□ -0.25
LMNA-222ENST00000508500 SPARCP09486 303 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 FMO3P31513 532 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 PSMB10P40306 273 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 ENTPD1P49961 510 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 SLC25A1P53007 311 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 GNB2P62879 340 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 TEX30Q5JUR7 227 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 LPCAT4Q643R3 524 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 MRPL21Q7Z2W9 205 aaKnown RBP13.52□□□□□ -0.25
LMNA-222ENST00000508500 ZDHHC13Q8IUH4 622 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 SPRYD4Q8WW59 207 aaPredicted RBP13.52□□□□□ -0.25
LMNA-222ENST00000508500 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 GCDHQ92947 438 aaPredicted RBP13.52□□□□□ -0.25
LMNA-222ENST00000508500 RDH12Q96NR8 316 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 KCNJ15Q99712 375 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 SEMA6AQ9H2E6 1030 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 REEP1Q9H902 201 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 MED20Q9H944 212 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 NTN4Q9HB63 628 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 CTSZQ9UBR2 303 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 OR5V1Q9UGF6 321 aa13.52□□□□□ -0.25
LMNA-222ENST00000508500 IGHV3OR16-10A0A075B7F0 116 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 FAM183AA6NL82 134 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 LRRC30A6NM36 301 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
LMNA-222ENST00000508500 FCN3O75636 299 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 CPT2P23786 658 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 OR8G1Q15617 311 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 CD300LDQ6UXZ3 194 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 SPATC1Q76KD6 591 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 OR2T33Q8NG76 320 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 DNAJC9Q8WXX5 260 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 ERGIC1Q969X5 290 aa13.51□□□□□ -0.25
LMNA-222ENST00000508500 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms