RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SNRPGP62308 76 aaKnown RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 EGR3Q06889 387 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 OR8G1Q15617 311 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 TRIP10Q15642 601 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 GFOD2Q3B7J2 385 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 SLC25A30Q5SVS4 291 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 ZNF322Q6U7Q0 402 aaPredicted RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 PRSS45Q7RTY3 260 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 SPERTQ8NA61 448 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 OR56B2PQ8NGI1 322 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 ITFG2Q969R8 447 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 MEGF10Q96KG7 1140 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 MBOAT4Q96T53 435 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 BRD7Q9NPI1 651 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 TMEM106BQ9NUM4 274 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 SMPD3Q9NY59 655 aaPredicted RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 COPS3Q9UNS2 423 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 CACNG2Q9Y698 323 aa14.13□□□□□ -0.15
SNCA-209ENST00000506244 NSD1Q96L73 2696 aaPredicted RBP14.13□□□□□ -0.15
SNCA-209ENST00000506244 ZANQ9Y493 2812 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 LRP5LA4QPB2 252 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 LRRC30A6NM36 301 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 A8MV72 311 aaPredicted RBP14.12□□□□□ -0.15
SNCA-209ENST00000506244 E9PQ18 207 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 MLNRO43193 412 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 OR2T7P0C7T2 308 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 ANPEPP15144 967 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 HCCSP53701 268 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 FAM166AQ6J272 317 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 PACRGLQ8N7B6 248 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 ZNF555Q8NEP9 628 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 CSNK2A3Q8NEV1 391 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 OR2T27Q8NH04 317 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 ERGIC1Q969X5 290 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 RAB39BQ96DA2 213 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 SLC29A1Q99808 456 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 YAE1D1Q9NRH1 226 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 WIPI2Q9Y4P8 454 aa14.12□□□□□ -0.15
SNCA-209ENST00000506244 C2CD3Q4AC94 2353 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 hCG_38984A0A1B0GV85 526 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 TMEM269A0A1B0GVZ9 245 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 ISPDA4D126 451 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 F5H5P2 479 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 KRT8P05787 483 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 CA6P23280 308 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 CD200P41217 278 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 GATA4P43694 442 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 MTNR1AP48039 350 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 MMP16P51512 607 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 ACTC1P68032 377 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 ACTA1P68133 377 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 FAM3AP98173 230 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 MVKQ03426 396 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 OCLNQ16625 522 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 AVPI1Q5T686 147 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 C1orf87Q8N0U7 546 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 OR10H4Q8NGA5 316 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 OR8B12Q8NGG6 310 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 CLDND2Q8NHS1 167 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 SGK3Q96BR1 496 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 Q96MT0 163 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 APOL4Q9BPW4 351 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 TTTY10Q9BZA0 68 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 VCXQ9H320 206 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 NARFLQ9H6Q4 476 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 GCM1Q9NP62 436 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 ABCB9Q9NP78 766 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 FAM206AQ9NX38 181 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 KCNS2Q9ULS6 477 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 NPTNQ9Y639 398 aa14.11□□□□□ -0.15
SNCA-209ENST00000506244 A0A0U1RQV5 110 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 LOC100289279A0A1B0GTE1 492 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 LOC100130705A0A1B0GUX0 176 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 C5orf63A6NC05 138 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 INAFM1C9JVW0 142 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 H0YL77 283 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 PSMD9O00233 223 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 HLA-DPB1P04440 258 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 IRF2P14316 349 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 PCMT1P22061 227 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 ANOS1P23352 680 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 GNALP38405 381 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 GSK3AP49840 483 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 OR8B8Q15620 311 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 ZNF181Q2M3W8 571 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 FAM220AQ7Z4H9 259 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 COMMD2Q86X83 199 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 SPICQ8N5J4 248 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 LINC01356Q8N9X3 169 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 OR11L1Q8NGX0 322 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 MSI2Q96DH6 328 aaKnown RBP14.1□□□□□ -0.15
SNCA-209ENST00000506244 MYCBPQ99417 103 aaPredicted RBP14.1□□□□□ -0.15
SNCA-209ENST00000506244 GAL3ST1Q99999 423 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 C14orf119Q9NWQ9 140 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 FAM118AQ9NWS6 357 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 TMEM160Q9NX00 188 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 TREM2Q9NZC2 230 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 NUFIP1Q9UHK0 495 aaKnown RBP14.1□□□□□ -0.15
SNCA-209ENST00000506244 PCDHGB1Q9Y5G3 927 aa14.1□□□□□ -0.15
SNCA-209ENST00000506244 B4DSR2 109 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms