RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 H0YL77 283 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 J3QRE1 110 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 IFNL4K9M1U5 179 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 WNT9BO14905 357 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CASQ2O14958 399 aaPredicted RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 PPIHO43447 177 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 GMDSO60547 372 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CDC14BO60729 498 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ENTPD6O75354 484 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 FSTL3O95633 263 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 IGLV3-1P01715 115 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ANXA2P07355 339 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 OR2T7P0C7T2 308 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CFL1P23528 166 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 IL2RGP31785 369 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 GZMKP49863 264 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 PRSS12P56730 875 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 RIPPLY3P57055 190 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CXCR4P61073 352 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 LMO4P61968 165 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 EGR3Q06889 387 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 SLC3A1Q07837 685 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 MAB21L1Q13394 359 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 RCN1Q15293 331 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ZNF181Q2M3W8 571 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 C6orf52Q5T4I8 152 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 MEDAGQ5VYS4 303 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CYB5R2Q6BCY4 276 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ZNF322Q6U7Q0 402 aaPredicted RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 FAM57BQ71RH2 274 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 KRT77Q7Z794 578 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ENTHD1Q8IYW4 607 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 RFLNBQ8N5W9 214 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 PACRGLQ8N7B6 248 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 BHLHE23Q8NDY6 225 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 OR10AD1Q8NGE0 317 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 OR51G2Q8NGK0 314 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 OR2T27Q8NH04 317 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 Q8TCH9 128 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 SPRYD4Q8WW59 207 aaPredicted RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 ITLN1Q8WWA0 313 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CCL17Q92583 94 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 ERGIC1Q969X5 290 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 MSI2Q96DH6 328 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 REEP6Q96HR9 211 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 SIGLEC11Q96RL6 698 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 SOX7Q9BT81 388 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 GCM1Q9NP62 436 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 TMEM106BQ9NUM4 274 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 FAM118AQ9NWS6 357 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 TMEM160Q9NX00 188 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 IMPAD1Q9NX62 359 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 SMPD3Q9NY59 655 aaPredicted RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 DNAJC27Q9NZQ0 273 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 MRM2Q9UI43 246 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.233e-6■■■■■ 26.9
CTSB-205ENST00000505496 NOP16Q9Y3C1 178 aaKnown RBP7.36□□□□□ -1.23
CTSB-205ENST00000505496 GMPPBQ9Y5P6 360 aa7.36□□□□□ -1.23
CTSB-205ENST00000505496 CHD3Q12873 2000 aaKnown RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 LOC100130705A0A1B0GUX0 176 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 TMEM269A0A1B0GVZ9 245 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 A0A1W2PQL4 384 aaPredicted RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 GGT3PA6NGU5 568 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 ZNF670-ZNF695F2Z2N8 137 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 F5H5P2 479 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 TPD52L2O43399 206 aaKnown RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 TBX1O43435 398 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 MPZL2O60487 215 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 SULT1C4O75897 302 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 IGHV2-70P01814 119 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 HLA-DPB1P04440 258 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 CA6P23280 308 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 MTNR1AP48039 350 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 SRP9P49458 86 aaKnown RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 GSK3AP49840 483 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 ISL1P61371 349 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 TIGD6Q17RP2 521 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 ZNF829Q3KNS6 432 aaPredicted RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 OGFRL1Q5TC84 451 aaPredicted RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 Q6ZSR3 168 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 Q71RC1 249 aaPredicted RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 SSX6Q7RTT6 188 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 SPERTQ8NA61 448 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 OR8B12Q8NGG6 310 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 OR56B2PQ8NGI1 322 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 CLDND2Q8NHS1 167 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 PGAM5Q96HS1 289 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 LYZL4Q96KX0 146 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 G6PC2Q9NQR9 355 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 DCAF16Q9NXF7 216 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 NUFIP1Q9UHK0 495 aaKnown RBP7.35□□□□□ -1.23
CTSB-205ENST00000505496 PPP1R3CQ9UQK1 317 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 WIPI2Q9Y4P8 454 aa7.35□□□□□ -1.23
CTSB-205ENST00000505496 CUBNO60494 3623 aa7.34□□□□□ -1.23
CTSB-205ENST00000505496 LOC100289279A0A1B0GTE1 492 aa7.34□□□□□ -1.23
CTSB-205ENST00000505496 INAFM1C9JVW0 142 aa7.34□□□□□ -1.23
CTSB-205ENST00000505496 TMEM178BH3BS89 294 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms