RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 FAM201AQ5SY85 155 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 LINC01590Q5TEZ4 76 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 PRAMEF6Q5VXH4 476 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 SPATC1Q76KD6 591 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 DPY19L4Q7Z388 723 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 TMEM179BQ7Z7N9 219 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 SPATA24Q86W54 205 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 KLBQ86Z14 1044 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 ERI1Q8IV48 349 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 IQCF1Q8N6M8 205 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 DEFB108BQ8NET1 73 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 OR8B3Q8NGG8 313 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 OR11L1Q8NGX0 322 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 Q8TCH9 128 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 NEIL1Q96FI4 390 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 PLEKHA8Q96JA3 519 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 OR8B2Q96RD0 313 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 INTS14Q96SY0 518 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 SLC6A7Q99884 636 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 TMEM246Q9BRR3 403 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 ADAT1Q9BUB4 502 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 TOR3AQ9H497 397 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 MED20Q9H944 212 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF556Q9HAH1 456 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 UFSP2Q9NUQ7 469 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 MRPL15Q9P015 296 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 PPIAL4AQ9Y536 164 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 N6AMT1Q9Y5N5 214 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 INSIG2Q9Y5U4 225 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 C5orf63A6NC05 138 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 PRR23D1E9PI22 279 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 FAM20BO75063 409 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 GLCEO94923 617 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 APOC1P02654 83 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 ANXA2P07355 339 aaKnown RBP7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 PRR23D2P0DMB1 279 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 OSMP13725 252 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 ANXA8P13928 327 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 FPR2P25090 351 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 POU1F1P28069 291 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 GSTT1P30711 240 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 ACTG1P63261 375 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 CBX1P83916 185 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 CDK5Q00535 292 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 GINS1Q14691 196 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 MPPED2Q15777 294 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 C12orf54Q6X4T0 127 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 DCDC5Q6ZRR9 648 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 SHFQ7M4L6 423 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 NLRC3Q7RTR2 1065 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 C19orf18Q8NEA5 215 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 OR56B2PQ8NGI1 322 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 FAM216AQ8WUB2 273 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 RNF133Q8WVZ7 376 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 C22orf15Q8WYQ4 148 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 DVL3Q92997 716 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 SPSB4Q96A44 273 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 SLC7A6OSQ96CW6 309 aaPredicted RBP7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 ABHD6Q9BV23 337 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 OR51V1Q9H2C8 321 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 YY1AP1Q9H869 796 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 SP140LQ9H930 580 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 MARCH7Q9H992 704 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 FN3KRPQ9HA64 309 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 NTN4Q9HB63 628 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 RNF7Q9UBF6 113 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 NUP50Q9UKX7 468 aa7.09□□□□□ -1.27
HMGXB4-207ENST00000498212 IGHV2-70DA0A0C4DH43 119 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 TCRBV3S1A0A5B6 114 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 A6NLC8 198 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 ANKRD30BLA7E2S9 258 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 FKBP6O75344 327 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 DNAJC8O75937 253 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 HMGN1P05114 100 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 LYNP07948 512 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 H2BFMP0C1H6 154 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 PRKACGP22612 351 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 DDOSTP39656 456 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 PITPNBP48739 271 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 PAX8Q06710 450 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 MZT1Q08AG7 82 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 TIGD6Q17RP2 521 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 KLHL12Q53G59 568 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 KLF17Q5JT82 389 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 PLBD1Q6P4A8 553 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 LRRN1Q6UXK5 716 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 RHOUQ7L0Q8 258 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 SLC16A9Q7RTY1 509 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 TIGD4Q8IY51 512 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 HS3ST5Q8IZT8 346 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 SPERTQ8NA61 448 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 OR52H1Q8NGJ2 320 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 ZMYND19Q96E35 227 aaPredicted RBP7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 REEP6Q96HR9 211 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 AMELYQ99218 206 aa7.08□□□□□ -1.28
HMGXB4-207ENST00000498212 MMADHCQ9H3L0 296 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms