RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TMEM100Q9NV29 134 aa13.64□□□□□ -0.23
SSBP1-214ENST00000498107 CNOT2Q9NZN8 540 aaKnown RBP13.64□□□□□ -0.23
SSBP1-214ENST00000498107 GNG8Q9UK08 70 aa13.64□□□□□ -0.23
SSBP1-214ENST00000498107 TPD52L2O43399 206 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 FAM20BO75063 409 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 PIPP12273 146 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MYL12AP19105 171 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MYF6P23409 242 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MRPS11P82912 194 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MRPL28Q13084 256 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 TESK1Q15569 626 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 CLEC12BQ2HXU8 276 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 GFOD2Q3B7J2 385 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 BCL2L15Q5TBC7 163 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 LIPNQ5VXI9 398 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 SYS1Q8N2H4 156 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 CSNK2A3Q8NEV1 391 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 OR8B12Q8NGG6 310 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 SIGLEC11Q96RL6 698 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 ALG8Q9BVK2 526 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MSL2Q9HCI7 577 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 CHCHD3Q9NX63 227 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 ERVK13-1Q9NX77 482 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MRPL15Q9P015 296 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 OR52A1Q9UKL2 312 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 GTF2A1LQ9UNN4 478 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 MYRFQ9Y2G1 1151 aa13.63□□□□□ -0.23
SSBP1-214ENST00000498107 EXOSC1Q9Y3B2 195 aaKnown RBP13.63□□□□□ -0.23
SSBP1-214ENST00000498107 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 MAGEB4O15481 346 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-214ENST00000498107 SPRY3O43610 288 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 SRSF10O75494 262 aaKnown RBP13.62□□□□□ -0.23
SSBP1-214ENST00000498107 RPP14O95059 124 aaKnown RBP13.62□□□□□ -0.23
SSBP1-214ENST00000498107 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 CD55P08174 381 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 DAOP14920 347 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 ATP6V1B1P15313 513 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 PDLIM4P50479 330 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 FAM3AP98173 230 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 TP53I3Q53FA7 332 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 TMEM255AQ5JRV8 349 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 LHFPL3Q86UP9 236 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 BHLHE23Q8NDY6 225 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 BPIFB6Q8NFQ5 453 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 UBASH3BQ8TF42 649 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 ELMOD3Q96FG2 381 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 ZNF184Q99676 751 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-214ENST00000498107 SLC30A2Q9BRI3 323 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 RHNO1Q9BSD3 238 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 SAP30LQ9HAJ7 183 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 SCN3BQ9NY72 215 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 ZNF319Q9P2F9 582 aa13.62□□□□□ -0.23
SSBP1-214ENST00000498107 DIMT1Q9UNQ2 313 aaKnown RBP13.62□□□□□ -0.23
SSBP1-214ENST00000498107 hCG_38984A0A1B0GV85 526 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 ANKRD30BLA7E2S9 258 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 NDUFS8O00217 210 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 MTRF1O75570 445 aaKnown RBP13.61□□□□□ -0.23
SSBP1-214ENST00000498107 TNFRSF1AP19438 455 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 GSK3AP49840 483 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 CCL8P80075 99 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 TNFAIP6P98066 277 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-214ENST00000498107 MZT1Q08AG7 82 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 TSTQ16762 297 aaKnown RBP13.61□□□□□ -0.23
SSBP1-214ENST00000498107 C6orf141Q5SZD1 244 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 TMPRSS11AQ6ZMR5 421 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 COMMD2Q86X83 199 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 KLBQ86Z14 1044 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 ELMOD2Q8IZ81 293 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 SPERTQ8NA61 448 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 ZNF540Q8NDQ6 660 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 OR2Z1Q8NG97 314 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 OR56B2PQ8NGI1 322 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 FAM168AQ92567 244 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 RDH5Q92781 318 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 GGHQ92820 318 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 C4orf36Q96KX1 117 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 G6PC2Q9NQR9 355 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 DLL4Q9NR61 685 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 ACOXLQ9NUZ1 547 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
SSBP1-214ENST00000498107 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-214ENST00000498107 A0A1B0GWJ7 208 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 LOC390937A0A1W2PQ73 354 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 J3QLW9 94 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 GMDSO60547 372 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 PNPP00491 289 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
SSBP1-214ENST00000498107 HTR1AP08908 422 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 ZNF19P17023 458 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 MAGEB1P43366 347 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 MAP2K3P46734 347 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 SRP9P49458 86 aaKnown RBP13.6□□□□□ -0.23
SSBP1-214ENST00000498107 OR12D2P58182 307 aa13.6□□□□□ -0.23
SSBP1-214ENST00000498107 MFGE8Q08431 387 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms