RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 SPATC1Q76KD6 591 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
NEK4-206ENST00000496822 OR6K6Q8NGW6 343 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 Q8TCH9 128 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 PYDC1Q8WXC3 89 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
NEK4-206ENST00000496822 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
NEK4-206ENST00000496822 CENPMQ9NSP4 180 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
NEK4-206ENST00000496822 LRRC30A6NM36 301 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 ZNF593O00488 134 aaPredicted RBP12.6□□□□□ -0.39
NEK4-206ENST00000496822 CFPP27918 469 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 GNB2P62879 340 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
NEK4-206ENST00000496822 ELF3P78545 371 aaPredicted RBP12.6□□□□□ -0.39
NEK4-206ENST00000496822 PAX8Q06710 450 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 OR8G1Q15617 311 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 TMEM179BQ7Z7N9 219 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 C1orf87Q8N0U7 546 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 CELF2-AS1Q8N7Q2 184 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 NEIL1Q96FI4 390 aaPredicted RBP12.6□□□□□ -0.39
NEK4-206ENST00000496822 JMJD8Q96S16 334 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 MRI1Q9BV20 369 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 S100A14Q9HCY8 104 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 CMC2Q9NRP2 79 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 DNAJB9Q9UBS3 223 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 NUP50Q9UKX7 468 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 RRP15Q9Y3B9 282 aaKnown RBP12.6□□□□□ -0.39
NEK4-206ENST00000496822 N6AMT1Q9Y5N5 214 aa12.6□□□□□ -0.39
NEK4-206ENST00000496822 IGHV3OR16-10A0A075B7F0 116 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 IGHV2-70DA0A0C4DH43 119 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 GGT3PA6NGU5 568 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 RIIAD1A6NNX1 92 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 ZNF878C9JN71 531 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 FSTL3O95633 263 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 IGHV4-38-2P0DP08 117 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 ZNF3P17036 446 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 FPR2P25090 351 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 PITPNBP48739 271 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
NEK4-206ENST00000496822 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 CD300LDQ6UXZ3 194 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 OR8B3Q8NGG8 313 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 OR56B2PQ8NGI1 322 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 TEX47Q8TBZ9 253 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 GIPC3Q8TF64 312 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 ZNF48Q96MX3 618 aaPredicted RBP12.59□□□□□ -0.39
NEK4-206ENST00000496822 DUX5Q96PT3 197 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 OR8B2Q96RD0 313 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 AMELYQ99218 206 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 FEVQ99581 238 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
NEK4-206ENST00000496822 SOX21Q9Y651 276 aaPredicted RBP12.59□□□□□ -0.39
NEK4-206ENST00000496822 H3BN98 237 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 E2F6O75461 281 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 TIPRLO75663 272 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 IFNGP01579 166 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 IRF2P14316 349 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 GRK5P34947 590 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 EIF2B1Q14232 305 aaKnown RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 TAF13Q15543 124 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 ATP6AP1Q15904 470 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 ZNF841Q6ZN19 808 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 DCDC5Q6ZRR9 648 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 DOK3Q7L591 496 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 ERI1Q8IV48 349 aaKnown RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 HS3ST5Q8IZT8 346 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 BOLLQ8N9W6 283 aaKnown RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 GCDHQ92947 438 aaPredicted RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 ERGIC1Q969X5 290 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 C1orf147Q96MC9 270 aaPredicted RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 INTS14Q96SY0 518 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 DCLRE1BQ9H816 532 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 MRPL15Q9P015 296 aaKnown RBP12.58□□□□□ -0.4
NEK4-206ENST00000496822 CTSZQ9UBR2 303 aa12.58□□□□□ -0.4
NEK4-206ENST00000496822 NBEAL1Q6ZS30 2694 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 ARRDC5A6NEK1 342 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 DNAJC9-AS1A6NH13 148 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 C22orf46C9J442 243 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 TBX1O43435 398 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 GMDSO60547 372 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 CPT2P23786 658 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 CX3CR1P49238 355 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 WDR25Q64LD2 544 aaPredicted RBP12.57□□□□□ -0.4
NEK4-206ENST00000496822 SFRP4Q6FHJ7 346 aaPredicted RBP12.57□□□□□ -0.4
NEK4-206ENST00000496822 BTNL3Q6UXE8 466 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 ZNF826PQ6ZT77 177 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 TIGD4Q8IY51 512 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 PARP8Q8N3A8 854 aa12.57□□□□□ -0.4
NEK4-206ENST00000496822 RNF133Q8WVZ7 376 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms