RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 ZNF319Q9P2F9 582 aa12.17□□□□□ -0.46
PDAP1-204ENST00000496335 STAB1Q9NY15 2570 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 RNF212BA8MTL3 300 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 XRCC2O43543 280 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 PRKYO43930 277 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 PNPP00491 289 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 MRPL3P09001 348 aaKnown RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 CD200P41217 278 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 RAD23AP54725 363 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 ESRRGP62508 458 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 HOXA4Q00056 320 aaPredicted RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 GFOD2Q3B7J2 385 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 TMEM155Q4W5P6 130 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 KDM4DQ6B0I6 523 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 C1orf229Q6ZS94 237 aaPredicted RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 TEAD3Q99594 435 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
PDAP1-204ENST00000496335 TMEM165Q9HC07 324 aa12.16□□□□□ -0.46
PDAP1-204ENST00000496335 A0A0G2JMP0 313 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 A0A0X1KG70 313 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 CCDC182A6NF36 153 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 GMDSO60547 372 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 FAM20BO75063 409 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 THBS2P35442 1172 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 GATA4P43694 442 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 FAM3AP98173 230 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 TIGD6Q17RP2 521 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 DCAF12L2Q5VW00 463 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 SLX4IPQ5VYV7 408 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 LRRN1Q6UXK5 716 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 CCDC121Q6ZUS5 278 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 ZNF454Q8N9F8 522 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 C19orf18Q8NEA5 215 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 OR4M2Q8NGB6 313 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 PYDC1Q8WXC3 89 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 TMPRSS13Q9BYE2 586 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 SLC22A4Q9H015 551 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 GABARAPL1Q9H0R8 117 aa12.15□□□□□ -0.46
PDAP1-204ENST00000496335 METTL17Q9H7H0 456 aaPredicted RBP12.15□□□□□ -0.46
PDAP1-204ENST00000496335 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
PDAP1-204ENST00000496335 LOC105371242A0A075B767 164 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 LRRC30A6NM36 301 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 ZAR1LA6NP61 321 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 CEACAM18A8MTB9 384 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 PSMD9O00233 223 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 APOC1P02654 83 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 FCGR1AP12314 374 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 ALOX5APP20292 161 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 POLR2IP36954 125 aaKnown RBP12.14□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 MUC20Q8N307 709 aaPredicted RBP12.14□□□□□ -0.47
PDAP1-204ENST00000496335 TCEANCQ8N8B7 351 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 PGAM5Q96HS1 289 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 CIB1Q99828 191 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 TMEM246Q9BRR3 403 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 OR10A2Q9H208 303 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 OPA3Q9H6K4 179 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 PPP1R3EQ9H7J1 279 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 SP140LQ9H930 580 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 MMP26Q9NRE1 261 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 LAMP5Q9UJQ1 280 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 OAZ3Q9UMX2 235 aa12.14□□□□□ -0.47
PDAP1-204ENST00000496335 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 hCG_38984A0A1B0GV85 526 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 SAC3D1A6NKF1 404 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 PRR32B1ATL7 298 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
PDAP1-204ENST00000496335 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 TRAPPC2LH3BP13 241 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 FOXH1O75593 365 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 WNT2P09544 360 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 IRF2P14316 349 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 ADRA2CP18825 462 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 DDOSTP39656 456 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 GSK3AP49840 483 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 EFNB1P98172 346 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 KPNB1Q14974 876 aaKnown RBP12.13□□□□□ -0.47
PDAP1-204ENST00000496335 C12orf73Q69YU5 71 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 DEFB108BQ8NET1 73 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 Q8TCH9 128 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 CENPNQ96H22 339 aaPredicted RBP12.13□□□□□ -0.47
PDAP1-204ENST00000496335 IL4I1Q96RQ9 567 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 PRRG3Q9BZD7 231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms