RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CD300LBA8K4G0 201 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 C17orf100A8MU93 164 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 J3QLW9 94 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 SLC1A7O00341 560 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 DENRO43583 198 aaKnown RBP14.61□□□□□ -0.07
HDAC6-235ENST00000495515 NAT2P11245 290 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 ZNF19P17023 458 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 MMP15P51511 669 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 EFNA4P52798 201 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 ART1P52961 327 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 OR12D2P58182 307 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 AHSA2Q719I0 299 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 COMMD2Q86X83 199 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 FTMTQ8N4E7 242 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 KLHL36Q8N4N3 616 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 OR8G5Q8NG78 346 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 OR13G1Q8NGZ3 307 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 C4orf36Q96KX1 117 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 SLC22A4Q9H015 551 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 ACOXLQ9NUZ1 547 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 NKIRAS2Q9NYR9 191 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 BLOC1S6Q9UL45 172 aa14.61□□□□□ -0.07
HDAC6-235ENST00000495515 CAB39Q9Y376 341 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-235ENST00000495515 NOP16Q9Y3C1 178 aaKnown RBP14.61□□□□□ -0.07
HDAC6-235ENST00000495515 ANKRD17O75179 2603 aaKnown RBP14.61□□□□□ -0.07
HDAC6-235ENST00000495515 SRSF10O75494 262 aaKnown RBP14.6□□□□□ -0.07
HDAC6-235ENST00000495515 PNPP00491 289 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 F12P00748 615 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-235ENST00000495515 LIMS3P0CW19 117 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 LIMS4P0CW20 117 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 ATP6V1B1P15313 513 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 TNFSF4P23510 183 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 MFGE8Q08431 387 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-235ENST00000495515 FAM209AQ5JX71 171 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 ELMOD2Q8IZ81 293 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 OR5AS1Q8N127 324 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 CSNK2A3Q8NEV1 391 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 RORBQ92753 470 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 SORCS2Q96PQ0 1159 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 TPK1Q9H3S4 243 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 G6PC2Q9NQR9 355 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 TMEM100Q9NV29 134 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 ZNF319Q9P2F9 582 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 ITGB1BP2Q9UKP3 347 aa14.6□□□□□ -0.07
HDAC6-235ENST00000495515 TACC2O95359 2948 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 hCG_38984A0A1B0GV85 526 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 C5orf63A6NC05 138 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 PTGES3LE9PB15 166 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 TPD52L2O43399 206 aaKnown RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 SPRY3O43610 288 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 MTRF1O75570 445 aaKnown RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 ADH4P08319 380 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 HTR1AP08908 422 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 GBX2P52951 348 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 FAM3AP98173 230 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 RBM48Q5RL73 367 aaKnown RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 SHEQ5VZ18 495 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 FDX2Q6P4F2 183 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 PRSS57Q6UWY2 283 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 CATSPERDQ86XM0 798 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 BHLHE23Q8NDY6 225 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 ZNF649Q9BS31 505 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 RHNO1Q9BSD3 238 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 EGLN1Q9GZT9 426 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 MSL2Q9HCI7 577 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 MYOZ1Q9NP98 299 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 DECR2Q9NUI1 292 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
HDAC6-235ENST00000495515 MRPL15Q9P015 296 aaKnown RBP14.59□□□□□ -0.07
HDAC6-235ENST00000495515 ZSCAN5BA6NJL1 495 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ANKRD30BLA7E2S9 258 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 IGHV4-39P01824 125 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 TTRP02766 147 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 RPSAP08865 295 aaKnown RBP14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ANOS1P23352 680 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 PSMB10P40306 273 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 MAP2K3P46734 347 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 GSK3AP49840 483 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ETV1P50549 477 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 OR8B8Q15620 311 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 TMEM255AQ5JRV8 349 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ZCCHC24Q8N2G6 241 aaKnown RBP14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ZNF786Q8N393 782 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 CCDC54Q8NEL0 328 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 OR56B2PQ8NGI1 322 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 OR2G2Q8NGZ5 317 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 OR52N1Q8NH53 320 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 OR51E1Q8TCB6 317 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 PELI1Q96FA3 418 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 SLC30A2Q9BRI3 323 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 CXXC4Q9H2H0 198 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 GPR84Q9NQS5 396 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 ERGIC3Q9Y282 383 aa14.58□□□□□ -0.08
HDAC6-235ENST00000495515 A0A1B0GVI7 797 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 MYL12BO14950 172 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 SSX4O60224 188 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 NDUFS7O75251 213 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 IGHV1-46P01743 117 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 CDK1P06493 297 aa14.57□□□□□ -0.08
HDAC6-235ENST00000495515 CSF3P09919 207 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms