RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 OR8G1Q15617 311 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 SPATS1Q496A3 300 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 KLHL12Q53G59 568 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 RPL13AP3Q6NVV1 102 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4L9Q6RFH8 374 aaPredicted RBP9.68□□□□□ -0.86
VTI1A-208ENST00000494728 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 TMEM179BQ7Z7N9 219 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 OR8B3Q8NGG8 313 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 SPTSSAQ969W0 71 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 OR8B2Q96RD0 313 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 NUDT16L1Q9BRJ7 211 aaKnown RBP9.68□□□□□ -0.86
VTI1A-208ENST00000494728 COPS4Q9BT78 406 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DGCR6LQ9BY27 220 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 NTN4Q9HB63 628 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF319Q9P2F9 582 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 DUX4Q9UBX2 424 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 SAMHD1Q9Y3Z3 626 aaKnown RBP9.68□□□□□ -0.86
VTI1A-208ENST00000494728 N6AMT1Q9Y5N5 214 aa9.68□□□□□ -0.86
VTI1A-208ENST00000494728 KIR2DS1A0A191URI9 304 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 B2RBV5 119 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 TNFRSF13BO14836 293 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 PPIAL4GP0DN37 164 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 SLC25A1P53007 311 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 MICAQ29983 383 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 OR2T5Q6IEZ7 315 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 DRAM2Q6UX65 266 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 LRRN1Q6UXK5 716 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 PRSS45Q7RTY3 260 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 GCSAMQ8N6F7 178 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 BOLLQ8N9W6 283 aaKnown RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 OR2T33Q8NG76 320 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 OR6K6Q8NGW6 343 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 OR2T29Q8NH02 315 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 RNF166Q96A37 237 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 CCDC124Q96CT7 223 aaKnown RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 KCNJ15Q99712 375 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 RASSF4Q9H2L5 321 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 MMADHCQ9H3L0 296 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-208ENST00000494728 MAGIXQ9H6Y5 334 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 CENPMQ9NSP4 180 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 C1orf123Q9NWV4 160 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 NDE1Q9NXR1 346 aa9.67□□□□□ -0.86
VTI1A-208ENST00000494728 IGHV3OR15-7A0A075B7D8 119 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 GGT3PA6NGU5 568 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF878C9JN71 531 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 ZNF593O00488 134 aaPredicted RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 PHYHO14832 338 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 TMPRSS2O15393 492 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 WIPF1O43516 503 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 SPRY1O43609 319 aaPredicted RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 MMP9P14780 707 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 FMO3P31513 532 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 CX3CR1P49238 355 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 CSNK2BP67870 215 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 FAM3AP98173 230 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 POU4F2Q12837 409 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 TEX30Q5JUR7 227 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 BTNL3Q6UXE8 466 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 RBMS3Q6XE24 437 aaKnown RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 NLRC3Q7RTR2 1065 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 SLC16A9Q7RTY1 509 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 DPY19L4Q7Z388 723 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 DHFR2Q86XF0 187 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 FAM90A1Q86YD7 464 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 C11orf53Q8IXP5 236 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 ADGRG5Q8IZF4 528 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 HS3ST5Q8IZT8 346 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 OR11L1Q8NGX0 322 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 ERGIC1Q969X5 290 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 SPSB4Q96A44 273 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 SEH1LQ96EE3 360 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 CCT8L2Q96SF2 557 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 TBX15Q96SF7 602 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 FGF23Q9GZV9 251 aaPredicted RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 MS4A7Q9GZW8 240 aaPredicted RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 REEP1Q9H902 201 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 FN3KRPQ9HA64 309 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 CMC2Q9NRP2 79 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 TAS2R1Q9NYW7 299 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 DNAJC27Q9NZQ0 273 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 MRPL15Q9P015 296 aaKnown RBP9.66□□□□□ -0.86
VTI1A-208ENST00000494728 RNF7Q9UBF6 113 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 KLHDC2Q9Y2U9 406 aa9.66□□□□□ -0.86
VTI1A-208ENST00000494728 hCG_38984A0A1B0GV85 526 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 CLDN34H7C241 214 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 LGALS8O00214 317 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ACOT8O14734 319 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 HOXA3O43365 443 aaPredicted RBP9.65□□□□□ -0.86
VTI1A-208ENST00000494728 TBX1O43435 398 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 ADAM20O43506 726 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 GMDSO60547 372 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 GYPAP02724 150 aa9.65□□□□□ -0.86
VTI1A-208ENST00000494728 GRPP07492 148 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms