RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 FAM201AQ5SY85 155 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 OR11L1Q8NGX0 322 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 OR5K1Q8NHB7 308 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 C19orf24Q9BVV8 132 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 TMEM165Q9HC07 324 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 TVP23BQ9NYZ1 205 aa27.87■■■□□ 2.05
CBX4-203ENST00000494546 MRPL15Q9P015 296 aaKnown RBP27.87■■■□□ 2.05
CBX4-203ENST00000494546 F5H0A9 414 aaPredicted RBP27.86■■■□□ 2.05
CBX4-203ENST00000494546 APOC1P02654 83 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 H2BFMP0C1H6 154 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 OPRL1P41146 370 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 NAA10P41227 235 aaPredicted RBP27.86■■■□□ 2.05
CBX4-203ENST00000494546 DAPP51397 102 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 CRISP1P54107 249 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 MPPED2Q15777 294 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 SNAPC1Q16533 368 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 TIGD6Q17RP2 521 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 ESCO2Q56NI9 601 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 C1orf146Q5VVC0 180 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 FAHD1Q6P587 224 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 FAM57BQ71RH2 274 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 THEM6Q8WUY1 208 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 ERGIC1Q969X5 290 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 SP140LQ9H930 580 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 BRD7Q9NPI1 651 aa27.86■■■□□ 2.05
CBX4-203ENST00000494546 PPIAL4EA0A075B759 164 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 PPIAL4DF5H284 164 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 GMDSO60547 372 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 FAM20BO75063 409 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 LYNP07948 512 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 PPIAL4FP0DN26 164 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 ZNF121P58317 390 aaPredicted RBP27.85■■■□□ 2.05
CBX4-203ENST00000494546 C1QL2Q7Z5L3 287 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 OTOSQ8NHW6 89 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 SPSB4Q96A44 273 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 MMADHCQ9H3L0 296 aaPredicted RBP27.85■■■□□ 2.05
CBX4-203ENST00000494546 MMP26Q9NRE1 261 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 PPIAL4AQ9Y536 164 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 ARHGAP32A7KAX9 2087 aa27.85■■■□□ 2.05
CBX4-203ENST00000494546 PPIAL4CA0A0B4J2A2 164 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 RPS2P15880 293 aaKnown RBP27.84■■■□□ 2.05
CBX4-203ENST00000494546 EPHA1P21709 976 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 ATP6AP1Q15904 470 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 SLC35D3Q5M8T2 416 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 RHOUQ7L0Q8 258 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 SLC16A9Q7RTY1 509 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 HIST2H2ABQ8IUE6 130 aaPredicted RBP27.84■■■□□ 2.05
CBX4-203ENST00000494546 ZNF454Q8N9F8 522 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 Q8TCH9 128 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 SGK3Q96BR1 496 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 REEP6Q96HR9 211 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 TMEM246Q9BRR3 403 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 FN3KRPQ9HA64 309 aa27.84■■■□□ 2.05
CBX4-203ENST00000494546 WNT2P09544 360 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 APOFQ13790 326 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 GFOD2Q3B7J2 385 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 NANPQ8TBE9 248 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 OR10A2Q9H208 303 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 OPN4Q9UHM6 478 aa27.83■■■□□ 2.05
CBX4-203ENST00000494546 TRAPPC2LH3BP13 241 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 RGS9O75916 674 aaPredicted RBP27.82■■■□□ 2.04
CBX4-203ENST00000494546 SLC2A5P22732 501 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 ZNF404Q494X3 552 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 PRSS45Q7RTY3 260 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 PARP8Q8N3A8 854 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 OR52H1Q8NGJ2 320 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 PGAM5Q96HS1 289 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 MIOXQ9UGB7 285 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 LRCH1Q9Y2L9 728 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 KLHDC2Q9Y2U9 406 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 POLR3KQ9Y2Y1 108 aaPredicted RBP27.82■■■□□ 2.04
CBX4-203ENST00000494546 AP4S1Q9Y587 144 aa27.82■■■□□ 2.04
CBX4-203ENST00000494546 ANKRD30BLA7E2S9 258 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 A8MXK9 166 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 G3V2T6 193 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 FASP25445 335 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 DDOSTP39656 456 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 FAM3AP98173 230 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 PTGES3Q15185 160 aaKnown RBP27.81■■■□□ 2.04
CBX4-203ENST00000494546 KLBQ86Z14 1044 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 SPERTQ8NA61 448 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 C19orf18Q8NEA5 215 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 KRT84Q9NSB2 600 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 ZNF319Q9P2F9 582 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 OR5V1Q9UGF6 321 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 WNK2Q9Y3S1 2297 aa27.81■■■□□ 2.04
CBX4-203ENST00000494546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP27.8■■■□□ 2.04
CBX4-203ENST00000494546 MITFO75030 526 aaPredicted RBP27.8■■■□□ 2.04
CBX4-203ENST00000494546 DEFB108BQ8NET1 73 aa27.8■■■□□ 2.04
CBX4-203ENST00000494546 SSBP3Q9BWW4 388 aaPredicted RBP27.8■■■□□ 2.04
CBX4-203ENST00000494546 RNF7Q9UBF6 113 aa27.8■■■□□ 2.04
CBX4-203ENST00000494546 FSTL3O95633 263 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 GRPP07492 148 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 CFL1P23528 166 aaKnown RBP27.79■■■□□ 2.04
CBX4-203ENST00000494546 HCCSP53701 268 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 ESRRGP62508 458 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 HOXA4Q00056 320 aaPredicted RBP27.79■■■□□ 2.04
CBX4-203ENST00000494546 ZNF154Q13106 437 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 LRRN1Q6UXK5 716 aa27.79■■■□□ 2.04
CBX4-203ENST00000494546 AMIGO2Q86SJ2 522 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms