RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OPA3Q9H6K4 179 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 SAP30LQ9HAJ7 183 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 TMEM100Q9NV29 134 aa11.5□□□□□ -0.57
COL1A1-208ENST00000494334 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 A0A096LNT2 108 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 A0A1B0GWJ7 208 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 METTL15A6NJ78 407 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
COL1A1-208ENST00000494334 MLNRO43193 412 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 CDC14BO60729 498 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 RP2O75695 350 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 HLA-DPB1P04440 258 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 GNAO1P09471 354 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 INHBBP09529 407 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 FOSL1P15407 271 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 ACHEP22303 614 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 GIFP27352 417 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 CRYBB2P43320 205 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 MFGE8Q08431 387 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-208ENST00000494334 IL18R1Q13478 541 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 RIN1Q13671 783 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 GFOD2Q3B7J2 385 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF829Q3KNS6 432 aaPredicted RBP11.49□□□□□ -0.57
COL1A1-208ENST00000494334 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 MAPK1IP1LQ8NDC0 245 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 SETD9Q8NE22 299 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 OR56B2PQ8NGI1 322 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 TFAP2CQ92754 450 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 LYZL4Q96KX0 146 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 SIGLEC11Q96RL6 698 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 SOX7Q9BT81 388 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 BPESC1Q9GZL8 116 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 EGLN1Q9GZT9 426 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 PBOV1Q9GZY1 135 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 RGCCQ9H4X1 137 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
COL1A1-208ENST00000494334 IL19Q9UHD0 177 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 MYRFQ9Y2G1 1151 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 RPL36Q9Y3U8 105 aaKnown RBP11.49□□□□□ -0.57
COL1A1-208ENST00000494334 PCDHGB1Q9Y5G3 927 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 R4GMQ9 66 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 HSPE1-MOB4S4R3N1 261 aa11.49□□□□□ -0.57
COL1A1-208ENST00000494334 IGHV1-69-2A0A0G2JMI3 117 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 DAPL1A0PJW8 107 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 H0YJX3 145 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 SULT1C4O75897 302 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 RPP14O95059 124 aaKnown RBP11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ATP6V1G2O95670 118 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 KRT8P05787 483 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 TNFSF4P23510 183 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 CFL1P23528 166 aaKnown RBP11.48□□□□□ -0.57
COL1A1-208ENST00000494334 DDOSTP39656 456 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 NR4A2P43354 598 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 GSK3AP49840 483 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 AQP4P55087 323 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 TMEM33P57088 247 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ACTC1P68032 377 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ACTA1P68133 377 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 RAB40BQ12829 278 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 LIPNQ5VXI9 398 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 YIPF7Q8N8F6 280 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 OR10AD1Q8NGE0 317 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ITLN1Q8WWA0 313 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 OR2V2Q96R30 315 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 G6PC2Q9NQR9 355 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF275Q9NSD4 429 aaPredicted RBP11.48□□□□□ -0.57
COL1A1-208ENST00000494334 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 MRPL15Q9P015 296 aaKnown RBP11.48□□□□□ -0.57
COL1A1-208ENST00000494334 NUFIP1Q9UHK0 495 aaKnown RBP11.48□□□□□ -0.57
COL1A1-208ENST00000494334 CACNG2Q9Y698 323 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 F8P00451 2351 aa11.48□□□□□ -0.57
COL1A1-208ENST00000494334 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 F5H5P2 479 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 LOC110117498-PIK3R3F6TDL0 507 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 FADS2O95864 444 aaKnown RBP11.47□□□□□ -0.57
COL1A1-208ENST00000494334 IGLV3-1P01715 115 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 CA6P23280 308 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 LOXL1Q08397 574 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-208ENST00000494334 OR8B8Q15620 311 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 TP53I3Q53FA7 332 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 KLHL22Q53GT1 634 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 C8orf59Q8N0T1 100 aaPredicted RBP11.47□□□□□ -0.57
COL1A1-208ENST00000494334 OR52I1Q8NGK6 324 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 CCL17Q92583 94 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 RORBQ92753 470 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 SMR3AQ99954 134 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF649Q9BS31 505 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 SLC22A4Q9H015 551 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 ZNF391Q9UJN7 358 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 OR52A1Q9UKL2 312 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
COL1A1-208ENST00000494334 FAM20BO75063 409 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 IGHA1P01876 353 aa11.46□□□□□ -0.57
COL1A1-208ENST00000494334 TTRP02766 147 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms