RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 THRSPQ92748 146 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 PIGTQ969N2 578 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 NARFLQ9H6Q4 476 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 FN3KRPQ9HA64 309 aa10.98□□□□□ -0.65
HMGN1-220ENST00000492280 MRPS28Q9Y2Q9 187 aaKnown RBP10.98□□□□□ -0.65
HMGN1-220ENST00000492280 A0A0J9YW62 118 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 TP53I11O14683 189 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 CRTAPO75718 401 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 RAD51DO75771 328 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 RFPL3SP0C7P2 107 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 FGF5P12034 268 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 PPP1R1AQ13522 171 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 CAMK2BQ13554 666 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 HLXQ14774 488 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 MAML2Q8IZL2 1156 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 BATF2Q8N1L9 274 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 NKAIN3Q8N8D7 197 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 RELL2Q8NC24 303 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 AGBL5Q8NDL9 886 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 OR5D14Q8NGL3 314 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 AQP3Q92482 292 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 PNPLA2Q96AD5 504 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 LYZL4Q96KX0 146 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 ALKBH3Q96Q83 286 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 SLC26A1Q9H2B4 701 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 SLC17A5Q9NRA2 495 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 PTTG3PQ9NZH4 202 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 PLEKHA6Q9Y2H5 1048 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 MAB21L2Q9Y586 359 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 TRAV14DV4A0A0A6YYC5 116 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 NSG1A0A0A6YYJ2 146 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 MEGF11A6BM72 1044 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM127O75204 238 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 IGHV3-9P01782 118 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 NTF4P34130 210 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 CSNK1A1P48729 337 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 MECP2P51608 486 aaKnown RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 QRFPP83859 136 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 FAM74A1Q5RGS3 127 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 DEGS2Q6QHC5 323 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 C3P1Q6ZMU1 363 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 TMUB2Q71RG4 321 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 KCTD9Q7L273 389 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 C12orf45Q8N5I9 185 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 TMEM229BQ8NBD8 167 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 OR6X1Q8NH79 312 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 IMMP1LQ96LU5 166 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 ELL3Q9HB65 397 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-220ENST00000492280 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 HPF1Q9NWY4 346 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF224Q9NZL3 707 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 ZNF581Q9P0T4 197 aa10.97□□□□□ -0.65
HMGN1-220ENST00000492280 SVILO95425 2214 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 IGLV3-32A0A0A0MS00 114 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 METTL21EPA6NDL7 271 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 ZSCAN5BA6NJL1 495 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 TTLL8A6PVC2 850 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 ZIC3O60481 467 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 SSR4P51571 173 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.65
HMGN1-220ENST00000492280 PGAM5Q96HS1 289 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 ARHGAP5-AS1Q96IT6 56 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 RADILQ96JH8 1075 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 C1orf147Q96MC9 270 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-220ENST00000492280 LPAR5Q9H1C0 372 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 KCNN3Q9UGI6 736 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 PCSK5Q92824 1860 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 SHANK1Q9Y566 2161 aa10.96□□□□□ -0.65
HMGN1-220ENST00000492280 OR14I1A6ND48 311 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 NPIPB13A6NJU9 1138 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 C9J4A7 227 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 NPIPB4C9JG80 1138 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 NPIPA2E9PIF3 369 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 NPIPA3F8WFD2 350 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF205O95201 554 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 HTR3BO95264 441 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 LIFP15018 202 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 SERPINA2P20848 420 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 Q0VFX4 171 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 ROBO4Q8WZ75 1007 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 MED30Q96HR3 178 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 PDCD10Q9BUL8 212 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 SLC39A1Q9NY26 324 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 RAB22AQ9UL26 194 aa10.96□□□□□ -0.66
HMGN1-220ENST00000492280 LINC00862A6NCI5 91 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 SDCBPO00560 298 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-220ENST00000492280 CD63P08962 238 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 SPINK2P20155 84 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 S100A11P31949 105 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 CCDC28AQ8IWP9 274 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 WDR13Q9H1Z4 485 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 RDH8Q9NYR8 311 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 STMND1H3BQB6 276 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 STK17BO94768 372 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 CRYZL1O95825 349 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 CD34P28906 385 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 NPY4RP50391 375 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms