RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PNPP00491 289 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 AVPP01185 164 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 MRPL3P09001 348 aaKnown RBP20.73■□□□□ 0.91
UPF3A-209ENST00000492270 FCGR1AP12314 374 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 ZFP36P26651 326 aaKnown RBP20.73■□□□□ 0.91
UPF3A-209ENST00000492270 CD200P41217 278 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 GATA4P43694 442 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 RAD23AP54725 363 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 TMEM155Q4W5P6 130 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 FAM201AQ5SY85 155 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 LRRN1Q6UXK5 716 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 CCDC121Q6ZUS5 278 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 SLC16A9Q7RTY1 509 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 SPICQ8N5J4 248 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 PYDC1Q8WXC3 89 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 SGK3Q96BR1 496 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 PATZ1Q9HBE1 687 aaKnown RBP20.73■□□□□ 0.91
UPF3A-209ENST00000492270 UFSP2Q9NUQ7 469 aa20.73■□□□□ 0.91
UPF3A-209ENST00000492270 ZAR1LA6NP61 321 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 IFNL4K9M1U5 179 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 MDH2P40926 338 aaKnown RBP20.72■□□□□ 0.91
UPF3A-209ENST00000492270 FAM3AP98173 230 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 HOXA4Q00056 320 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-209ENST00000492270 MPPED2Q15777 294 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 TIGD6Q17RP2 521 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 GFOD2Q3B7J2 385 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 SLX4IPQ5VYV7 408 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 C1orf229Q6ZS94 237 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-209ENST00000492270 RHOUQ7L0Q8 258 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 KLHL36Q8N4N3 616 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 ZNF454Q8N9F8 522 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 REEP6Q96HR9 211 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 TEAD3Q99594 435 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 CIB1Q99828 191 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 OAZ3Q9UMX2 235 aa20.72■□□□□ 0.91
UPF3A-209ENST00000492270 ZNF181Q2M3W8 571 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 C12orf73Q69YU5 71 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 CELF2-AS1Q8N7Q2 184 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 TCEANCQ8N8B7 351 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 PGAM5Q96HS1 289 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 TMPRSS13Q9BYE2 586 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 TTTY10Q9BZA0 68 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 SLC22A4Q9H015 551 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 OPA3Q9H6K4 179 aa20.71■□□□□ 0.91
UPF3A-209ENST00000492270 MRPL15Q9P015 296 aaKnown RBP20.71■□□□□ 0.91
UPF3A-209ENST00000492270 hCG_38984A0A1B0GV85 526 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 SAC3D1A6NKF1 404 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 CEACAM18A8MTB9 384 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 F5H0A9 414 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 GMDSO60547 372 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 FAM20BO75063 409 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 APOC1P02654 83 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 ALOX5APP20292 161 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 KPNB1Q14974 876 aaKnown RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 DCAF12L2Q5VW00 463 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 MUC20Q8N307 709 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 C19orf18Q8NEA5 215 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 CENPNQ96H22 339 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 PRRG3Q9BZD7 231 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 METTL17Q9H7H0 456 aaPredicted RBP20.7■□□□□ 0.9
UPF3A-209ENST00000492270 TMEM165Q9HC07 324 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 LAMP5Q9UJQ1 280 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 LRP12Q9Y561 859 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 DNHD1Q96M86 4753 aa20.7■□□□□ 0.9
UPF3A-209ENST00000492270 LOC105371242A0A075B767 164 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 A0A0G2JMP0 313 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 A0A0X1KG70 313 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 RNF212BA8MTL3 300 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 PRR32B1ATL7 298 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 PSMD9O00233 223 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 THBS2P35442 1172 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 POLR2IP36954 125 aaKnown RBP20.69■□□□□ 0.9
UPF3A-209ENST00000492270 EFNB1P98172 346 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 LCN1P1Q5VSP4 162 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 OR4M2Q8NGB6 313 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 OR52H1Q8NGJ2 320 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 Q8TCH9 128 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 YIPF3Q9GZM5 350 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 OR10A2Q9H208 303 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 PPP1R3EQ9H7J1 279 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 SP140LQ9H930 580 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 COPS3Q9UNS2 423 aa20.69■□□□□ 0.9
UPF3A-209ENST00000492270 NOP16Q9Y3C1 178 aaKnown RBP20.69■□□□□ 0.9
UPF3A-209ENST00000492270 LRRC30A6NM36 301 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 PSMA6P60900 246 aaKnown RBP20.68■□□□□ 0.9
UPF3A-209ENST00000492270 ACTR3P61158 418 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 KRT77Q7Z794 578 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 RFLNBQ8N5W9 214 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 TMEM163Q8TC26 289 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 IL4I1Q96RQ9 567 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 PKP2Q99959 881 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 TMEM246Q9BRR3 403 aa20.68■□□□□ 0.9
UPF3A-209ENST00000492270 PPIAL4EA0A075B759 164 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 PPIAL4DF5H284 164 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 H3BNX3 289 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 FOXH1O75593 365 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 PTBP3O95758 552 aaKnown RBP20.67■□□□□ 0.9
UPF3A-209ENST00000492270 PPIAL4FP0DN26 164 aa20.67■□□□□ 0.9
UPF3A-209ENST00000492270 ADRA2CP18825 462 aa20.67■□□□□ 0.9
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