RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FAM3AP98173 230 aa9.83□□□□□ -0.84
SRSF4-204ENST00000489898 SHQ1Q6PI26 577 aaKnown RBP9.83□□□□□ -0.84
SRSF4-204ENST00000489898 CCDC121Q6ZUS5 278 aa9.83□□□□□ -0.84
SRSF4-204ENST00000489898 PEG10Q86TG7 708 aaKnown RBP9.83□□□□□ -0.84
SRSF4-204ENST00000489898 MUC20Q8N307 709 aaPredicted RBP9.83□□□□□ -0.84
SRSF4-204ENST00000489898 OR5L1Q8NGL2 311 aa9.83□□□□□ -0.84
SRSF4-204ENST00000489898 TAF15Q92804 592 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRSF4-204ENST00000489898 PCDHB10Q9UN67 800 aa9.83□□□□□ -0.84
SRSF4-204ENST00000489898 CCDC182A6NF36 153 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SURF4O15260 269 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SELENOFO60613 162 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 GMNNO75496 209 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 IGLV3-1P01715 115 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SPARCP09486 303 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 RPS2P15880 293 aaKnown RBP9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SRP9P49458 86 aaKnown RBP9.82□□□□□ -0.84
SRSF4-204ENST00000489898 PRKXP51817 358 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 MXRA7P84157 204 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 CDK5Q00535 292 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 OR8B8Q15620 311 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 LIPNQ5VXI9 398 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 WDR25Q64LD2 544 aaPredicted RBP9.82□□□□□ -0.84
SRSF4-204ENST00000489898 ZNF826PQ6ZT77 177 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 PGAP1Q75T13 922 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 KRT74Q7RTS7 529 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SLC16A9Q7RTY1 509 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 FAM90A1Q86YD7 464 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 KLHL36Q8N4N3 616 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SIGLECL1Q8N7X8 197 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 ATG16L2Q8NAA4 619 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 HPSE2Q8WWQ2 592 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 LYZL4Q96KX0 146 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 KCNJ15Q99712 375 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 ABHD6Q9BV23 337 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 CHID1Q9BWS9 393 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 SSBP3Q9BWW4 388 aaPredicted RBP9.82□□□□□ -0.84
SRSF4-204ENST00000489898 TLNRD1Q9H1K6 362 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 PRDM13Q9H4Q3 707 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 REEP1Q9H902 201 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 MRPL15Q9P015 296 aaKnown RBP9.82□□□□□ -0.84
SRSF4-204ENST00000489898 BAIAP2Q9UQB8 552 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 NOTCH1P46531 2555 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 TGP01266 2768 aa9.82□□□□□ -0.84
SRSF4-204ENST00000489898 IFNL4K9M1U5 179 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 ZNF593O00488 134 aaPredicted RBP9.81□□□□□ -0.84
SRSF4-204ENST00000489898 PHYHO14832 338 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 GLCEO94923 617 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 HLA-DQA2P01906 255 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 TPTEP56180 551 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 CSNK2BP67870 215 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 GK3PQ14409 553 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 TEX36Q5VZQ5 186 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 SLC27A4Q6P1M0 643 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 FAHD1Q6P587 224 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 DCDC5Q6ZRR9 648 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 SPATC1Q76KD6 591 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 PARP8Q8N3A8 854 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 NANPQ8TBE9 248 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 UTP4Q969X6 686 aaKnown RBP9.81□□□□□ -0.84
SRSF4-204ENST00000489898 SGK3Q96BR1 496 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 NEIL1Q96FI4 390 aaPredicted RBP9.81□□□□□ -0.84
SRSF4-204ENST00000489898 TBX15Q96SF7 602 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 SLC25A19Q9HC21 320 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 UFSP2Q9NUQ7 469 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 TMEM100Q9NV29 134 aa9.81□□□□□ -0.84
SRSF4-204ENST00000489898 TRAV40A0A0B4J280 105 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 SRSF10O75494 262 aaKnown RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 EPHA2P29317 976 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 FMO3P31513 532 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 DCTDP32321 178 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 PITPNBP48739 271 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 CX3CR1P49238 355 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 MNAT1P51948 309 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 ZNF121P58317 390 aaPredicted RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 EFNB1P98172 346 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 FAM98BQ52LJ0 330 aaKnown RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 ESCO2Q56NI9 601 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 AWAT1Q58HT5 328 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 TRPM8Q7Z2W7 1104 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 MRPL21Q7Z2W9 205 aaKnown RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 OR6K6Q8NGW6 343 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 OR2AJ1Q8NGZ0 328 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 OTOSQ8NHW6 89 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 ZNF418Q8TF45 676 aaPredicted RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 GIPC3Q8TF64 312 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 SPTSSAQ969W0 71 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 ITPKCQ96DU7 683 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 ZMYND19Q96E35 227 aaPredicted RBP9.8□□□□□ -0.84
SRSF4-204ENST00000489898 SEH1LQ96EE3 360 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 INTS14Q96SY0 518 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 COPS4Q9BT78 406 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 NUP50Q9UKX7 468 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 POMPQ9Y244 141 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 PPIAL4AQ9Y536 164 aa9.8□□□□□ -0.84
SRSF4-204ENST00000489898 AUP1Q9Y679 476 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms