RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LPAR3Q9UBY5 353 aa11.95□□□□□ -0.5
COL9A2-208ENST00000488463 IGHV3-64DA0A0J9YX35 117 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 hCG_38984A0A1B0GV85 526 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 SAC3D1A6NKF1 404 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 XRCC2O43543 280 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 ALPLP05186 524 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 CA6P23280 308 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 ZNF181Q2M3W8 571 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 LRRN1Q6UXK5 716 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 C1orf229Q6ZS94 237 aaPredicted RBP11.94□□□□□ -0.5
COL9A2-208ENST00000488463 MEPCEQ7L2J0 689 aaKnown RBP11.94□□□□□ -0.5
COL9A2-208ENST00000488463 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 TCEANCQ8N8B7 351 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 OR56B2PQ8NGI1 322 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 THEM6Q8WUY1 208 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 SPRYD4Q8WW59 207 aaPredicted RBP11.94□□□□□ -0.5
COL9A2-208ENST00000488463 TMEM186Q96B77 213 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 TEX12Q9BXU0 123 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 OPA3Q9H6K4 179 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 HIF1ANQ9NWT6 349 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 DNAJC27Q9NZQ0 273 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 MRPL15Q9P015 296 aaKnown RBP11.94□□□□□ -0.5
COL9A2-208ENST00000488463 COPS3Q9UNS2 423 aa11.94□□□□□ -0.5
COL9A2-208ENST00000488463 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
COL9A2-208ENST00000488463 IFNL4K9M1U5 179 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 PLPP2O43688 288 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 FSTL3O95633 263 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 BAG2O95816 211 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 APOC1P02654 83 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
COL9A2-208ENST00000488463 H2BFMP0C1H6 154 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 HSD11B1P28845 292 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 SRP9P49458 86 aaKnown RBP11.93□□□□□ -0.5
COL9A2-208ENST00000488463 RPS7P62081 194 aaKnown RBP11.93□□□□□ -0.5
COL9A2-208ENST00000488463 BTG1P62324 171 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 ROM1Q03395 351 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 MPPED2Q15777 294 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 TMEM155Q4W5P6 130 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 NXNL2Q5VZ03 156 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 FAM57BQ71RH2 274 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 MOGAT3Q86VF5 341 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 GLCCI1Q86VQ1 547 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 OR52H1Q8NGJ2 320 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 OR51F2Q8NH61 342 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 Q8TCH9 128 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
COL9A2-208ENST00000488463 REEP6Q96HR9 211 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 PPP1R3EQ9H7J1 279 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 DCLRE1BQ9H816 532 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 ADGRL4Q9HBW9 690 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 S100A14Q9HCY8 104 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 LRP12Q9Y561 859 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 N6AMT1Q9Y5N5 214 aa11.93□□□□□ -0.5
COL9A2-208ENST00000488463 TRAV20A0A0B4J274 112 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 GMDSO60547 372 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 SRSF10O75494 262 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 AVPP01185 164 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 MRPL3P09001 348 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 PSMA6P60900 246 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 HOXA4Q00056 320 aaPredicted RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 OR8B8Q15620 311 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 FAM201AQ5SY85 155 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 DEGS2Q6QHC5 323 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 RAB39BQ96DA2 213 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 LYZL4Q96KX0 146 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 IL4I1Q96RQ9 567 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 GAL3ST1Q99999 423 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 RBM4BQ9BQ04 359 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 PRRG3Q9BZD7 231 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 SLC22A4Q9H015 551 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 PATZ1Q9HBE1 687 aaKnown RBP11.92□□□□□ -0.5
COL9A2-208ENST00000488463 FAM206AQ9NX38 181 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 USE1Q9NZ43 259 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 ENOPH1Q9UHY7 261 aa11.92□□□□□ -0.5
COL9A2-208ENST00000488463 ISPDA4D126 451 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 GGT3PA6NGU5 568 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 TBX1O43435 398 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 ZNF205O95201 554 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 SBK2P0C263 348 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 ACKR3P25106 362 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 THBS2P35442 1172 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 DDOSTP39656 456 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 GSK3AP49840 483 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 SEC61A1P61619 476 aaKnown RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 OR8G1Q15617 311 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 LCN1P1Q5VSP4 162 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 KRT74Q7RTS7 529 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 PEG10Q86TG7 708 aaKnown RBP11.91□□□□□ -0.5
COL9A2-208ENST00000488463 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 OR8B12Q8NGG6 310 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
COL9A2-208ENST00000488463 OR8B4Q96RC9 309 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms