RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 YARS2Q9Y2Z4 477 aaKnown RBP1.51□□□□□ -2.17
R3HDM1-219ENST00000488035 AHDC1Q5TGY3 1603 aaPredicted RBP1.51□□□□□ -2.17
R3HDM1-219ENST00000488035 WDR19Q8NEZ3 1342 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 SHANK1Q9Y566 2161 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 IGHV3OR16-9A0A0B4J2B5 98 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 IGHV7-4-1A0A0J9YVY3 117 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 LRRIQ4A6NIV6 560 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 OR5H1A6NKK0 313 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 SERPINE3A8MV23 424 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 SUPT3HB4E1H0 165 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 GOLGA8TH3BQL2 631 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 AKR7A2O43488 359 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 SLC16A7O60669 478 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 CDRT1O95170 752 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 FGFR1OPO95684 399 aaKnown RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 TGM6O95932 706 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 IGHV3-11P01762 117 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 ASGR1P07306 291 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 TPM2P07951 284 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 KRT16P08779 473 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF688P0C7X2 276 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 PFN2P35080 140 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 GGT2P36268 569 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 MYCNOSP40205 109 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 TNFSF9P41273 254 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 PPICP45877 212 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 CMC4P56277 68 aaPredicted RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 IL18Q14116 193 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 STUMQ69YW2 141 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 UNQ9165/PRO28630Q6UXU0 137 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 BHLHA15Q7RTS1 189 aaPredicted RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF101Q8IZC7 436 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 MYOCDQ8IZQ8 938 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 VKORC1L1Q8N0U8 176 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 OR52K2Q8NGK3 314 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 OR1J4Q8NGS1 313 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 OR13G1Q8NGZ3 307 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 AGR3Q8TD06 166 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 CA5BP1Q8WTZ4 195 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 RAB1CQ92928 201 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF707Q96C28 371 aaPredicted RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 HAUS1Q96CS2 278 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 MTG1Q9BT17 334 aaPredicted RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 OR2AG1Q9H205 316 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 C1orf198Q9H425 327 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 PRSS16Q9NQE7 514 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 PXMP2Q9NR77 195 aa1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 RBFOX1Q9NWB1 397 aaKnown RBP1.5□□□□□ -2.17
R3HDM1-219ENST00000488035 TTC41PQ6P2S7 1318 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 C2orf16Q68DN1 1984 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF99A8MXY4 864 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 H7C0C1 242 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 TNFRSF11BO00300 401 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 CDC40O60508 579 aaKnown RBP eCLIP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 TALDO1P37837 337 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 ATP6V0D1P61421 351 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 RAD51Q06609 339 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 PNOCQ13519 176 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 PIGHQ14442 188 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 TEX30Q5JUR7 227 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 KDM4DQ6B0I6 523 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 GUSBP11Q6P575 273 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 APRG1Q8IVJ8 170 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 COMMD1Q8N668 190 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 OR5T1Q8NG75 326 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 OR10G6Q8NH81 332 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 CPNE4Q96A23 557 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 APH1AQ96BI3 265 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 BTN2A3PQ96KV6 586 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 TBL1YQ9BQ87 522 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 RSG1Q9BU20 258 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 OSBPL11Q9BXB4 747 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 NAA50Q9GZZ1 169 aaKnown RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 DHX35Q9H5Z1 703 aaKnown RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 C8orf33Q9H7E9 229 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 C21orf62Q9NYP8 219 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 RABL2AQ9UBK7 228 aaPredicted RBP1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 RHBDD3Q9Y3P4 386 aa1.49□□□□□ -2.17
R3HDM1-219ENST00000488035 HIVEP2P31629 2446 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 IGKV1D-17A0A075B6S4 117 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 IGHV3-49A0A0A0MS15 119 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 NCF1BA6NI72 391 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 NCF1CA8MVU1 366 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 CASQ2O14958 399 aaPredicted RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 IGKV1-17P01599 117 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 IGLV2-8P01709 118 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 IL4P05112 153 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 GLAP06280 429 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 SFTPCP11686 197 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 CD82P27701 267 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 PRLHRP49683 370 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 ZNF33AQ06730 810 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 PPIDQ08752 370 aaKnown RBP1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 HIKESHIQ53FT3 197 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 AP1ARQ63HQ0 302 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 WDR82Q6UXN9 313 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 RTL4Q6ZR62 310 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 TRAM1L1Q8N609 369 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 MIR7-3HGQ8N6C7 128 aa1.48□□□□□ -2.17
R3HDM1-219ENST00000488035 LRRC52Q8N7C0 313 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms