RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GRPP07492 148 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 SFTPBP07988 381 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 SLC2A1P11166 492 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 MMP9P14780 707 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 CFHR2P36980 270 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 NPY4RP50391 375 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 POU4F2Q12837 409 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 PPP1R8Q12972 351 aaKnown RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 OR8B8Q15620 311 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 PCK2Q16822 640 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 GPR157Q5UAW9 335 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 CD276Q5ZPR3 534 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 RPL13AP3Q6NVV1 102 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 CYP2R1Q6VVX0 501 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 Q6YL49 198 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 RASSF6Q6ZTQ3 369 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 SPATC1Q76KD6 591 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 CPLX4Q7Z7G2 160 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 PLPP7Q8NBV4 271 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 SLAMF6Q96DU3 332 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 TECTBQ96PL2 329 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 TBX15Q96SF7 602 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 KCNJ15Q99712 375 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 PCGF1Q9BSM1 259 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 COPS4Q9BT78 406 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 ADAT1Q9BUB4 502 aaKnown RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 TSSK6Q9BXA6 273 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 NMNAT2Q9BZQ4 307 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 MMADHCQ9H3L0 296 aaPredicted RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 TNFRSF19Q9NS68 423 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 NOP16Q9Y3C1 178 aaKnown RBP10.12□□□□□ -0.79
VPS16-208ENST00000487461 COMMD3-BMI1R4GMX3 469 aa10.12□□□□□ -0.79
VPS16-208ENST00000487461 CENPVL3A0A0U1RRI6 287 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SRRM5B3KS81 715 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 ADAM20O43506 726 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 CCNB2O95067 398 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 LHBP01229 141 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 GYPAP02724 150 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 LIPFP07098 398 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SPARCP09486 303 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 CLUP10909 449 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 FMO3P31513 532 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 ENTPD1P49961 510 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 GYS2P54840 703 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 BPIFB3P59826 476 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 CRMP1Q14194 572 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 TAF13Q15543 124 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 KCNJ8Q15842 424 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SPATS1Q496A3 300 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 TEX30Q5JUR7 227 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 C16orf89Q6UX73 402 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 C11orf53Q8IXP5 236 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 LNX2Q8N448 690 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 LINC00471Q8N535 108 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 GCSAMQ8N6F7 178 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SPERTQ8NA61 448 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 OR56B2PQ8NGI1 322 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 OR4Q3Q8NH05 313 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SGK3Q96BR1 496 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SLITRK2Q9H156 845 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 SMURF1Q9HCE7 757 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 NOX4Q9NPH5 578 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 MMP24Q9Y5R2 645 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 MEGF8Q7Z7M0 2845 aa10.11□□□□□ -0.79
VPS16-208ENST00000487461 IGHV3OR15-7A0A075B7D8 119 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 TRAV38-1A0A0B4J264 116 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 TCRBV5S2A0A599 114 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 OOEPA6NGQ2 149 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 P2RY10O00398 339 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 NDUFA2O43678 99 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 TOX4O94842 621 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 SPI1P17947 270 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 ATP6V1B2P21281 511 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 MAGEA2P43356 314 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 SLC25A1P53007 311 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 SRSF4Q08170 494 aaKnown RBP10.1□□□□□ -0.79
VPS16-208ENST00000487461 FIP1L1Q6UN15 594 aaKnown RBP10.1□□□□□ -0.79
VPS16-208ENST00000487461 PIGWQ7Z7B1 504 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 WDR86Q86TI4 376 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 FAM90A1Q86YD7 464 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 AQP11Q8NBQ7 271 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 SPSB4Q96A44 273 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 WDFY2Q96P53 400 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 CHIAQ9BZP6 476 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 MARCH7Q9H992 704 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 TBC1D23Q9NUY8 699 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 VNN3Q9NY84 501 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 ACTR3BQ9P1U1 418 aa10.1□□□□□ -0.79
VPS16-208ENST00000487461 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.09□□□□□ -0.79
VPS16-208ENST00000487461 DHRS12A0PJE2 317 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 ERICH4A6NGS2 130 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 A6NLC8 198 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 DVL1O14640 695 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 XRCC2O43543 280 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 SOX14O95416 240 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 MELTFP08582 738 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 ARF6P62330 175 aa10.09□□□□□ -0.79
VPS16-208ENST00000487461 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms