RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 HS3ST3B1Q9Y662 390 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF814B7Z6K7 855 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 OR2F2O95006 317 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 IGHEP01854 428 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 CHRM2P08172 466 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 QDPRP09417 244 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 DSCR4P56555 118 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-208ENST00000487245 OR2F1Q13607 317 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 CARD17Q5XLA6 110 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 OR10R2Q8NGX6 335 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 OR1S1Q8NH92 325 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 MITD1Q8WV92 249 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 MRGPRFQ96AM1 343 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 LINC00052Q96N35 136 aa23.08■■□□□ 1.29
HLA-C-208ENST00000487245 PHF3Q92576 2039 aaKnown RBP23.08■■□□□ 1.28
HLA-C-208ENST00000487245 BET1O15155 118 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 EIF1BO60739 113 aaKnown RBP23.07■■□□□ 1.28
HLA-C-208ENST00000487245 HLA-AP01891 365 aaKnown RBP23.07■■□□□ 1.28
HLA-C-208ENST00000487245 CCL4P13236 92 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 NUP62P37198 522 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-208ENST00000487245 PAQR8Q8TEZ7 354 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 NKD1Q969G9 470 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 FBXO4Q9UKT5 387 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 TNFSF18Q9UNG2 199 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 NOP16Q9Y3C1 178 aaKnown RBP23.07■■□□□ 1.28
HLA-C-208ENST00000487245 GDF9O60383 454 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 VAMP5O95183 116 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 CELA2AP08217 269 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 CD63P08962 238 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF20P17024 532 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 CCL1P22362 96 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 CHST4Q8NCG5 386 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 GUCD1Q96NT3 240 aa23.07■■□□□ 1.28
HLA-C-208ENST00000487245 NAA11Q9BSU3 229 aaPredicted RBP23.07■■□□□ 1.28
HLA-C-208ENST00000487245 PATE3B3GLJ2 98 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 HPP00738 406 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 PDGFBP01127 241 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-208ENST00000487245 HOXD4P09016 255 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-208ENST00000487245 LIFP15018 202 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 GRB2P62993 217 aaKnown RBP23.06■■□□□ 1.28
HLA-C-208ENST00000487245 EIF3IQ13347 325 aaKnown RBP23.06■■□□□ 1.28
HLA-C-208ENST00000487245 MFAP5Q13361 173 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 NKPD1Q17RQ9 610 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 HYAL4Q2M3T9 481 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 C11orf87Q6NUJ2 197 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 PGAP1Q75T13 922 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 BVESQ8NE79 360 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 OR13C9Q8NGT0 318 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 CMBLQ96DG6 245 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 SH2D2AQ9NP31 389 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 SLC39A1Q9NY26 324 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 COMMD9Q9P000 198 aa23.06■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF230Q9UIE0 474 aaPredicted RBP23.06■■□□□ 1.28
HLA-C-208ENST00000487245 A0A1B0GW55 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 C9orf170A2RU37 121 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L2P0CJ85 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L3P0CJ86 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L4P0CJ87 422 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L5P0CJ88 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L6P0CJ89 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4L7P0CJ90 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 NAT1P18440 290 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CDAP32320 146 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 ZNF93P35789 620 aaPredicted RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CD96P40200 585 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CASRP41180 1078 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 FOLR3P41439 243 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 GUCA1AP43080 201 aaPredicted RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 LSM6P62312 80 aaKnown RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 H3F3AP84243 136 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 TRIM61Q5EBN2 209 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 RPS19BP1Q86WX3 136 aaKnown RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 ST8SIA2Q92186 375 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CST11Q9H112 138 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 IFT46Q9NQC8 304 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 PRDM6Q9NQX0 595 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 DUX4Q9UBX2 424 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 NSG1A0A0A6YYJ2 146 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 STK17BO94768 372 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 GSTP1P09211 210 aaKnown RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CLDN17P56750 224 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 MLF1P58340 268 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 ZXDAP98168 799 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 TAGLNQ01995 201 aaKnown RBP23.05■■□□□ 1.28
HLA-C-208ENST00000487245 SLC23A3Q6PIS1 610 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 C17orf107Q6ZR85 190 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 CD163Q86VB7 1156 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 ANGPTL5Q86XS5 388 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 OR5AS1Q8N127 324 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 SPERTQ8NA61 448 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 OR51E1Q8TCB6 317 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 SHARPINQ9H0F6 387 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 ASH2LQ9UBL3 628 aa23.05■■□□□ 1.28
HLA-C-208ENST00000487245 SSX5O60225 188 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 RAMP1O60894 148 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 CCL3P10147 92 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 PPP1R1AQ13522 171 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 FAM189A2Q15884 450 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 AWAT2Q6E213 333 aa23.04■■□□□ 1.28
HLA-C-208ENST00000487245 MAML2Q8IZL2 1156 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms