RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 BTG1P62324 171 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 FAM3AP98173 230 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 AADACL4Q5VUY2 407 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 FAM57BQ71RH2 274 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 SLC16A9Q7RTY1 509 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 BCDIN3DQ7Z5W3 292 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 MOGAT3Q86VF5 341 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 PYDC1Q8WXC3 89 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 CIB1Q99828 191 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 OSBPL10Q9BXB5 764 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 YIPF3Q9GZM5 350 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 OPA3Q9H6K4 179 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 SP140LQ9H930 580 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 UBAP1Q9NZ09 502 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 MRPL15Q9P015 296 aaKnown RBP12.59□□□□□ -0.39
YIF1A-208ENST00000485820 OAZ3Q9UMX2 235 aa12.59□□□□□ -0.39
YIF1A-208ENST00000485820 M0R129 80 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 TBX1O43435 398 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 FSTL3O95633 263 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 AVPP01185 164 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 ZFP36P26651 326 aaKnown RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 DDOSTP39656 456 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 KPNB1Q14974 876 aaKnown RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 OR8G1Q15617 311 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 MPPED2Q15777 294 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 FAHD2BQ6P2I3 314 aaPredicted RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 MEPCEQ7L2J0 689 aaKnown RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
YIF1A-208ENST00000485820 KLHL36Q8N4N3 616 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 TCEANCQ8N8B7 351 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 OR52H1Q8NGJ2 320 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 Q8TCH9 128 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 ERGIC1Q969X5 290 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 FAHD2AQ96GK7 314 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 BRD7Q9NPI1 651 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
YIF1A-208ENST00000485820 H3BNX3 289 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 ZNF205O95201 554 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 WNT2P09544 360 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 MDH2P40926 338 aaKnown RBP12.57□□□□□ -0.4
YIF1A-208ENST00000485820 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 PRAMEF6Q5VXH4 476 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 LRRN1Q6UXK5 716 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 TMEM163Q8TC26 289 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 REEP6Q96HR9 211 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 PKP2Q99959 881 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 TMPRSS13Q9BYE2 586 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 PCDHB10Q9UN67 800 aa12.57□□□□□ -0.4
YIF1A-208ENST00000485820 POLR3KQ9Y2Y1 108 aaPredicted RBP12.57□□□□□ -0.4
YIF1A-208ENST00000485820 NOP16Q9Y3C1 178 aaKnown RBP12.57□□□□□ -0.4
YIF1A-208ENST00000485820 COL6A5A8TX70 2615 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 hCG_38984A0A1B0GV85 526 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 SAC3D1A6NKF1 404 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PRR32B1ATL7 298 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 F5H0A9 414 aaPredicted RBP12.56□□□□□ -0.4
YIF1A-208ENST00000485820 EBAG9O00559 213 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 FAM20BO75063 409 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PNPP00491 289 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 GSK3AP49840 483 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 SEC61A1P61619 476 aaKnown RBP12.56□□□□□ -0.4
YIF1A-208ENST00000485820 LCN2P80188 198 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 TIGD6Q17RP2 521 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 NXNL2Q5VZ03 156 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 DEGS2Q6QHC5 323 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 KLBQ86Z14 1044 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 DVL3Q92997 716 aaPredicted RBP12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PGAM5Q96HS1 289 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 IL4I1Q96RQ9 567 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 GABARAPL3Q9BY60 117 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PRRG3Q9BZD7 231 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 OR10A2Q9H208 303 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PPP1R3EQ9H7J1 279 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 UFSP2Q9NUQ7 469 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 H2AFY2Q9P0M6 372 aaPredicted RBP12.56□□□□□ -0.4
YIF1A-208ENST00000485820 COPS3Q9UNS2 423 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 LRP12Q9Y561 859 aa12.56□□□□□ -0.4
YIF1A-208ENST00000485820 PPIAL4EA0A075B759 164 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 PPIAL4CA0A0B4J2A2 164 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 LRRC30A6NM36 301 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 CEACAM18A8MTB9 384 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 PPIAL4DF5H284 164 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 TRAPPC2LH3BP13 241 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 PSMD9O00233 223 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
YIF1A-208ENST00000485820 FOXH1O75593 365 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
YIF1A-208ENST00000485820 PPIAL4FP0DN26 164 aa12.55□□□□□ -0.4
YIF1A-208ENST00000485820 CFL1P23528 166 aaKnown RBP12.55□□□□□ -0.4
YIF1A-208ENST00000485820 SRP14P37108 136 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms