RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ZNF92Q03936 586 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 PSG7Q13046 419 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
CCM2-215ENST00000482714 MST1LQ2TV78 715 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 MRPL21Q7Z2W9 205 aaKnown RBP13.16□□□□□ -0.3
CCM2-215ENST00000482714 FTMTQ8N4E7 242 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 PIGTQ969N2 578 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 PTTG3PQ9NZH4 202 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 N6AMT1Q9Y5N5 214 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 PMF1-BGLAPU3KQ54 211 aa13.16□□□□□ -0.3
CCM2-215ENST00000482714 TMEM212A6NML5 194 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 MT-ND2P03891 347 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 FAM3AP98173 230 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 ZMAT1Q5H9K5 638 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 GLYATL3Q5SZD4 288 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 KLBQ86Z14 1044 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 CSNK2A3Q8NEV1 391 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 RPS4Y2Q8TD47 263 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 C10orf35Q96D05 121 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
CCM2-215ENST00000482714 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 UBTD1Q9HAC8 227 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 PURGQ9UJV8 347 aaKnown RBP13.15□□□□□ -0.3
CCM2-215ENST00000482714 SLC22A13Q9Y226 551 aa13.15□□□□□ -0.3
CCM2-215ENST00000482714 A0A087WXM4 84 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 IQCF6A8MYZ5 107 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 PLPP2O43688 288 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 CD53P19397 219 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 CCL1P22362 96 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 PSMB10P40306 273 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 MAP2K3P46734 347 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 ERVS71-1P61550 626 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 SNRPD2P62316 118 aaKnown RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 EMX1Q04741 257 aaPredicted RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 OR8B8Q15620 311 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 WDR38Q5JTN6 314 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 ZBTB37Q5TC79 503 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 DOK3Q7L591 496 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 PRSS35Q8N3Z0 413 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 SGCDQ92629 289 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 DIRC2Q96SL1 478 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 TRAF4Q9BUZ4 470 aaPredicted RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 ACOT13Q9NPJ3 140 aa13.14□□□□□ -0.31
CCM2-215ENST00000482714 LSM2Q9Y333 95 aaKnown RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 NOP16Q9Y3C1 178 aaKnown RBP13.14□□□□□ -0.31
CCM2-215ENST00000482714 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 PLSCR5A0PG75 271 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 GGT3PA6NGU5 568 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 DHRS3O75911 302 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 CD8AP01732 235 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
CCM2-215ENST00000482714 HLXQ14774 488 aaPredicted RBP13.13□□□□□ -0.31
CCM2-215ENST00000482714 CDK5R1Q15078 307 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 MED22Q15528 200 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 MSMPQ1L6U9 139 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 DMKNQ6E0U4 476 aaPredicted RBP13.13□□□□□ -0.31
CCM2-215ENST00000482714 OR8G5Q8NG78 346 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 OR5AK2Q8NH90 309 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 IGFBPL1Q8WX77 278 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 SMIM19Q96E16 107 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 POFUT1Q9H488 388 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
CCM2-215ENST00000482714 TAAR3PQ9P1P4 343 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 ST6GALNAC2Q9UJ37 374 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 ZDHHC8Q9ULC8 765 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
CCM2-215ENST00000482714 A0A1B0GTI1 187 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 A0A1B0GVI7 797 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 E9PI62 339 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 M0R233 179 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
CCM2-215ENST00000482714 CLPTM1O96005 669 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 SOD3P08294 240 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 ADH4P08319 380 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 ACHEP22303 614 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 MPV17P39210 176 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 GSK3AP49840 483 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 PPOXP50336 477 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 RIPPLY1Q0D2K3 151 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
CCM2-215ENST00000482714 TPBGQ13641 420 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 FAM209AQ5JX71 171 aa13.12□□□□□ -0.31
CCM2-215ENST00000482714 OR2T2Q6IF00 324 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms