RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GABRG1Q8N1C3 465 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 DNAJC5GQ8N7S2 189 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 OR1J1Q8NGS3 322 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-216ENST00000481242 TAS2R4Q9NYW5 299 aa8.54□□□□□ -1.04
GARNL3-216ENST00000481242 AHCTF1Q8WYP5 2266 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SCN4AP35499 1836 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 NCR1O76036 304 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 GNG3P63215 75 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 PWWP2BQ6NUJ5 590 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ROBO4Q8WZ75 1007 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 LIN7CQ9NUP9 197 aaKnown RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 CGGBP1Q9UFW8 167 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 LINC00862A6NCI5 91 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ST8SIA3O43173 380 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 C1QAP02745 245 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 GPR12P47775 334 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SHEQ5VZ18 495 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 FAM199XQ6PEV8 388 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 FAM185AQ8N0U4 392 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SUMF2Q8NBJ7 301 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 OR2AK2Q8NG84 335 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 OR10G3Q8NGC4 313 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 OR13G1Q8NGZ3 307 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 OR2G2Q8NGZ5 317 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SLC35E1Q96K37 410 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ESRP2Q9H6T0 727 aaKnown RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 CLEC2DQ9UHP7 191 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 MBD1Q9UIS9 605 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 TRPM6Q9BX84 2022 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ASCC3Q8N3C0 2202 aaKnown RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 LOC105371267A0A1B0GV96 52 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 EFSO43281 561 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 DNPH1O43598 174 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF354AO60765 605 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 LY86O95711 162 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 ANXA7P20073 488 aaKnown RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 APEX1P27695 318 aaKnown RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 RAC3P60763 192 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 KIAA0040Q15053 153 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 LRRC10Q5BKY1 277 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 OR4Q3Q8NH05 313 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 CIB3Q96Q77 187 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-216ENST00000481242 TMPRSS5Q9H3S3 457 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SPAG17Q6Q759 2223 aa8.53□□□□□ -1.04
GARNL3-216ENST00000481242 SERPINE3A8MV23 424 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 CD160O95971 181 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 ADRA2CP18825 462 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 PTAFRP25105 342 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF626Q68DY1 528 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 ZNF680Q8NEM1 530 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 DYNC2LI1Q8TCX1 351 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 OR8B4Q96RC9 309 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 SF3B5Q9BWJ5 86 aaKnown RBP8.52□□□□□ -1.04
GARNL3-216ENST00000481242 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 CHST6Q9GZX3 395 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 IKZF5Q9H5V7 419 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 SLC39A9Q9NUM3 307 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 GPATCH2Q9NW75 528 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 TRAPPC4Q9Y296 219 aa8.52□□□□□ -1.04
GARNL3-216ENST00000481242 GALR2O43603 387 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 AVPR2P30518 371 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 RFC3P40938 356 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF117Q03924 483 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 Q6ZRG5 221 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 MOB1BQ7L9L4 216 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 CDC20BQ86Y33 519 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 OTOSQ8NHW6 89 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 CT55Q8WUE5 264 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 MYOZ1Q9NP98 299 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 TAS2R16Q9NYV7 291 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 PLA2G3Q9NZ20 509 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 FOXJ3Q9UPW0 622 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 A0A1B0GV50 99 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 HS3ST1O14792 307 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 NDUFB3O43676 98 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 GP1BAP07359 652 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 OR8U8P0C7N1 319 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 FAM157BP0CG42 384 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 AGFG1P52594 562 aaKnown RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 EBPQ15125 230 aaKnown RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 PNLIPRP3Q17RR3 467 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 HEPHL1Q6MZM0 1159 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 BCDIN3DQ7Z5W3 292 aaKnown RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 ALKBH3Q96Q83 286 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 SERTAD4Q9NUC0 356 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 A4GNTQ9UNA3 340 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 SCN1AP35498 2009 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 TRGV10A0A0A0MS01 117 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 HOXD4P09016 255 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-216ENST00000481242 ZNF85Q03923 595 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 DYRK1AQ13627 763 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 TCTN1Q2MV58 587 aa8.52□□□□□ -1.05
GARNL3-216ENST00000481242 FAM209BQ5JX69 171 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms