RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	DNAJC9	Q8WXX5	260 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	SGK3	Q96BR1	496 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	ADAT1	Q9BUB4	502 aa	Known RBP	10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	TMPRSS13	Q9BYE2	586 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	TTTY10	Q9BZA0	68 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	TOR3A	Q9H497	397 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	METTL17	Q9H7H0	456 aa	Predicted RBP	10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	PPP1R3E	Q9H7J1	279 aa		10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	PATZ1	Q9HBE1	687 aa	Known RBP	10.81	□□□□□ -0.68
ABCF3-215	ENST00000481116	SAC3D1	A6NKF1	404 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PSMD9	O00233	223 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	XRCC2	O43543	280 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	FAM20B	O75063	409 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	ADRA2C	P18825	462 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PCMT1	P22061	227 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	MDH2	P40926	338 aa	Known RBP	10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	CD200	P41217	278 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	RAD23A	P54725	363 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	ESRRG	P62508	458 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	FAM3A	P98173	230 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TIGD6	Q17RP2	521 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TMEM155	Q4W5P6	130 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLC35D3	Q5M8T2	416 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	DCAF12L2	Q5VW00	463 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	KDM4D	Q6B0I6	523 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLC16A9	Q7RTY1	509 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PHC2	Q8IXK0	858 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PARP8	Q8N3A8	854 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	KLHL36	Q8N4N3	616 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TCEANC	Q8N8B7	351 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PYDC1	Q8WXC3	89 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	SPSB4	Q96A44	273 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	REEP6	Q96HR9	211 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	PGAM5	Q96HS1	289 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TEAD3	Q99594	435 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TEX12	Q9BXU0	123 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	TMEM165	Q9HC07	324 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	MMP26	Q9NRE1	261 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	ATR	Q13535	2644 aa		10.8	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZAR1L	A6NP61	321 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	CEACAM18	A8MTB9	384 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	PRR32	B1ATL7	298 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116		F5H0A9	414 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	TRAPPC2L	H3BP13	241 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	GMDS	O60547	372 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	RGS9	O75916	674 aa	Predicted RBP	10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	GRP	P07492	148 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	ALOX5AP	P20292	161 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	POLR2I	P36954	125 aa	Known RBP	10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	GATA4	P43694	442 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	KRTAP24-1	Q3LI83	254 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLX4IP	Q5VYV7	408 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	LYPD2	Q6UXB3	125 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZNF826P	Q6ZT77	177 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	CCDC121	Q6ZUS5	278 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZDHHC13	Q8IUH4	622 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	SPIC	Q8N5J4	248 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	BOLL	Q8N9W6	283 aa	Known RBP	10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	CIB1	Q99828	191 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	TMEM246	Q9BRR3	403 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	GABARAPL1	Q9H0R8	117 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	MRPL15	Q9P015	296 aa	Known RBP	10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	METRN	Q9UJH8	293 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	LAMP5	Q9UJQ1	280 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	OAZ3	Q9UMX2	235 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	COPS3	Q9UNS2	423 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	LRP12	Q9Y561	859 aa		10.79	□□□□□ -0.68
ABCF3-215	ENST00000481116	DNHD1	Q96M86	4753 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	PPIAL4E	A0A075B759	164 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116		A0A0G2JMP0	313 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116		A0A0X1KG70	313 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	hCG_38984	A0A1B0GV85	526 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	PPIAL4D	F5H284	164 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	IFNL4	K9M1U5	179 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	WNT2	P09544	360 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	PPIAL4F	P0DN26	164 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	GSK3A	P49840	483 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	EFNB1	P98172	346 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	KPNB1	Q14974	876 aa	Known RBP	10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZNF181	Q2M3W8	571 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	C12orf73	Q69YU5	71 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	KRT77	Q7Z794	578 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	MUC20	Q8N307	709 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	RFLNB	Q8N5W9	214 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	CELF2-AS1	Q8N7Q2	184 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	ZNF454	Q8N9F8	522 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	DEFB108B	Q8NET1	73 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	OR4M2	Q8NGB6	313 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	CENPN	Q96H22	339 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	LYZL4	Q96KX0	146 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	IL4I1	Q96RQ9	567 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	PKP2	Q99959	881 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	SLC22A4	Q9H015	551 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	OR10A2	Q9H208	303 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	OCEL1	Q9H607	264 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	OPA3	Q9H6K4	179 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	C7orf69	Q9H7B7	122 aa		10.78	□□□□□ -0.68
ABCF3-215	ENST00000481116	PPIAL4A	Q9Y536	164 aa		10.78	□□□□□ -0.68

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