RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 A6NIZ1 184 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 SULT2B1O00204 365 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 CTDSPLO15194 276 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 FGF2P09038 288 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 RAP1BP61224 184 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 MFGE8Q08431 387 aaPredicted RBP12.15□□□□□ -0.46
USP42-206ENST00000479544 ZNF74Q16587 644 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 VWA2Q5GFL6 755 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 UQCC3Q6UW78 93 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 EXD3Q8N9H8 876 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 OR51F2Q8NH61 342 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 PIPOXQ9P0Z9 390 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 C7orf77A4D0Y5 90 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 OR5K4A6NMS3 321 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 OR4C45A6NMZ5 311 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 ICOSLGO75144 302 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 MYOGP15173 224 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
USP42-206ENST00000479544 NKAIN2Q5VXU1 208 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 TAAR8Q969N4 342 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 LCORQ96JN0 433 aaPredicted RBP12.15□□□□□ -0.46
USP42-206ENST00000479544 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 MMP25Q9NPA2 562 aa12.15□□□□□ -0.46
USP42-206ENST00000479544 C4orf51C9J302 202 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 MSTNO14793 375 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 GPR37O15354 613 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 HPP00738 406 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CD63P08962 238 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CTLA4P16410 223 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 LAP3P28838 519 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 SLC37A1P57057 533 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 TSTD1Q8NFU3 115 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 OR1J1Q8NGS3 322 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 RSPRY1Q96DX4 576 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 REEP6Q96HR9 211 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 A0A1W2PNR3 127 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 LINC00587B1AMM8 73 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 MBTPS2O43462 519 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ANGPTL7O43827 346 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 PTP4A3O75365 173 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CXCL10P02778 98 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 THY1P04216 161 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CRHP06850 196 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CDAP32320 146 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 SHEQ5VZ18 495 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 C20orf196Q8IYI0 205 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CA13Q8N1Q1 262 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 SNIP1Q8TAD8 396 aaKnown RBP12.14□□□□□ -0.47
USP42-206ENST00000479544 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 EIF3GO75821 320 aaKnown RBP eCLIP12.14□□□□□ -0.47
USP42-206ENST00000479544 C1QL1O75973 258 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ADRA2CP18825 462 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ZNF84P51523 738 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 FAM53BQ14153 422 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 C16orf47Q6ZP98 133 aaPredicted RBP12.14□□□□□ -0.47
USP42-206ENST00000479544 ANKRD33Q7Z3H0 272 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 LRP11Q86VZ4 500 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 SFTPA2Q8IWL1 248 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CLEC1AQ8NC01 280 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 TMEM52Q8NDY8 209 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CCDC54Q8NEL0 328 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 OR52N5Q8NH56 324 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
USP42-206ENST00000479544 ARHGAP5-AS1Q96IT6 56 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 FBXL17Q9UF56 701 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 AK3Q9UIJ7 227 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 PADI1Q9ULC6 663 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 IGKV1-8A0A0C4DH67 115 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 A0A0G2JK05 382 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 HLA-HP01893 362 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 FOSL1P15407 271 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 MUC1P15941 1255 aaPredicted RBP12.14□□□□□ -0.47
USP42-206ENST00000479544 HMGN3Q15651 99 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 HFEQ30201 348 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ZNF595Q8IYB9 648 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 OR13C8Q8NGS7 320 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 DDIT4LQ96D03 193 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 MEGF10Q96KG7 1140 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 AMELYQ99218 206 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 CNTD2Q9H8S5 307 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 WDR87Q6ZQQ6 2873 aa12.14□□□□□ -0.47
USP42-206ENST00000479544 ARPC3O15145 178 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 ST8SIA3O43173 380 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 EML2O95834 649 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 CHRM2P08172 466 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 GUSBP08236 651 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
USP42-206ENST00000479544 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
USP42-206ENST00000479544 PHF19Q5T6S3 580 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 CST9LP1Q5W188 147 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
USP42-206ENST00000479544 ZNF611Q8N823 705 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms