RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 INPP5EQ9NRR6 644 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 MYRFQ9Y2G1 1151 aa22.81■■□□□ 1.24
CCM2-211ENST00000478582 ZSCAN5BA6NJL1 495 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 SSX4O60224 188 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 HEXAP06865 529 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 CFL1P23528 166 aaKnown RBP22.8■■□□□ 1.24
CCM2-211ENST00000478582 TIGD6Q17RP2 521 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 CDONQ4KMG0 1287 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 LAIR2Q6ISS4 152 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 Q6ZR03 302 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 Q71RC1 249 aaPredicted RBP22.8■■□□□ 1.24
CCM2-211ENST00000478582 OR8B12Q8NGG6 310 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 REEP6Q96HR9 211 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 MYCBPQ99417 103 aaPredicted RBP22.8■■□□□ 1.24
CCM2-211ENST00000478582 JAM3Q9BX67 310 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 MSL2Q9HCI7 577 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 PLCXD1Q9NUJ7 323 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 ZNF391Q9UJN7 358 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 R4GMQ9 66 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 ZFHX3Q15911 3703 aa22.8■■□□□ 1.24
CCM2-211ENST00000478582 A0A1B0GWJ7 208 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 IRGMA1A4Y4 181 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 PNPP00491 289 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 IGHV1-46P01743 117 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 FAM209AQ5JX71 171 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 YIPF7Q8N8F6 280 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 SLC30A2Q9BRI3 323 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 ZNF649Q9BS31 505 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 PBOV1Q9GZY1 135 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 MOB1AQ9H8S9 216 aa22.79■■□□□ 1.24
CCM2-211ENST00000478582 MYOZ1Q9NP98 299 aaPredicted RBP22.79■■□□□ 1.24
CCM2-211ENST00000478582 NUFIP1Q9UHK0 495 aaKnown RBP22.79■■□□□ 1.24
CCM2-211ENST00000478582 A0A0U1RQV5 110 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 CD300LBA8K4G0 201 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 CD55P08174 381 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 DDOSTP39656 456 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 DSCR9P59020 149 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 FAM3AP98173 230 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 GALEQ14376 348 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 LIPNQ5VXI9 398 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 OR5AS1Q8N127 324 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 ITFG2Q969R8 447 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 MRPL48Q96GC5 212 aaKnown RBP22.78■■□□□ 1.24
CCM2-211ENST00000478582 SIGLEC11Q96RL6 698 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 ANKRD60Q9BZ19 345 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 G6PC2Q9NQR9 355 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 SNX5Q9Y5X3 404 aa22.78■■□□□ 1.24
CCM2-211ENST00000478582 GGT3PA6NGU5 568 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 LOC110117498-PIK3R3F6TDL0 507 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 FAM20BO75063 409 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 LY6HO94772 140 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 TACSTD2P09758 323 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 MYF6P23409 242 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 DCKP27707 260 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 MAGEB1P43366 347 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 PRSS12P56730 875 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 MFGE8Q08431 387 aaPredicted RBP22.77■■□□□ 1.24
CCM2-211ENST00000478582 OR13G1Q8NGZ3 307 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 ERVK13-1Q9NX77 482 aa22.77■■□□□ 1.24
CCM2-211ENST00000478582 hCG_38984A0A1B0GV85 526 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 SPRY3O43610 288 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 LILRA1O75019 489 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 IGLV3-1P01715 115 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 CSF3P09919 207 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 DAOP14920 347 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 HOXB4P17483 251 aaPredicted RBP22.76■■□□□ 1.23
CCM2-211ENST00000478582 ACTA2P62736 377 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 ACTG2P63267 376 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 MRPS11P82912 194 aaKnown RBP22.76■■□□□ 1.23
CCM2-211ENST00000478582 TP53I3Q53FA7 332 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 FAM220AQ7Z4H9 259 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 UBASH3BQ8TF42 649 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 SPRYD4Q8WW59 207 aaPredicted RBP22.76■■□□□ 1.23
CCM2-211ENST00000478582 GGHQ92820 318 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 POM121Q96HA1 1249 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 REG4Q9BYZ8 158 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 OR52A1Q9UKL2 312 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 RAB26Q9ULW5 256 aa22.76■■□□□ 1.23
CCM2-211ENST00000478582 NF1P21359 2839 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 RNF223E7ERA6 249 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 NCR1O76036 304 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 HPXP02790 462 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 PIPP12273 146 aaPredicted RBP22.75■■□□□ 1.23
CCM2-211ENST00000478582 CSNK2BP67870 215 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 CCL8P80075 99 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 OR8B8Q15620 311 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 LHFPL3Q86UP9 236 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 ELMOD2Q8IZ81 293 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 SYS1Q8N2H4 156 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 ZNF786Q8N393 782 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 ZNF525Q8N782 197 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 BHLHE23Q8NDY6 225 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 RORBQ92753 470 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 RNF166Q96A37 237 aaPredicted RBP22.75■■□□□ 1.23
CCM2-211ENST00000478582 LYZL4Q96KX0 146 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 ALG8Q9BVK2 526 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 SLC22A4Q9H015 551 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 TMEM100Q9NV29 134 aa22.75■■□□□ 1.23
CCM2-211ENST00000478582 CNOT2Q9NZN8 540 aaKnown RBP22.75■■□□□ 1.23
CCM2-211ENST00000478582 MRPL15Q9P015 296 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms