RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 REEP1Q9H902 201 aa12.05□□□□□ -0.48
SMARCE1-209ENST00000478349 DYSFO75923 2080 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 IGHV3OR16-10A0A075B7F0 116 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 hCG_1807616A0A1W2PRN6 198 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TVP23AA6NH52 213 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TMPRSS2O15393 492 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 ADAM20O43506 726 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TIPRLO75663 272 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 ECDO95905 644 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 PAICSP22234 425 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 MSX2P35548 267 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 MAGEA2P43356 314 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 SLC25A1P53007 311 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF92Q03936 586 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 SNAI3Q3KNW1 292 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 FAM98BQ52LJ0 330 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TEX30Q5JUR7 227 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 SPATC1Q76KD6 591 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TMEM86BQ8N661 226 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 BOLLQ8N9W6 283 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 SLC37A3Q8NCC5 494 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 OR9Q2Q8NGE9 314 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 OR10S1Q8NGN2 331 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 OR6K6Q8NGW6 343 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 GATAD2BQ8WXI9 593 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 DACT3Q96B18 629 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 FAM71F1Q96KD3 344 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF48Q96MX3 618 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 BTBD10Q9BSF8 475 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 PCGF1Q9BSM1 259 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 TSSK6Q9BXA6 273 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 UNKLQ9H9P5 680 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 CENPMQ9NSP4 180 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 C1orf123Q9NWV4 160 aa12.04□□□□□ -0.48
SMARCE1-209ENST00000478349 ZNF879B4DU55 563 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 TBX1O43435 398 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 TOX4O94842 621 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 HOXB6P17509 224 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 GNALP38405 381 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 PMELP40967 661 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 PRKXP51817 358 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 PRSS12P56730 875 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 PDCD1Q15116 288 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 MPPED2Q15777 294 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 TIGD6Q17RP2 521 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 FAM201AQ5SY85 155 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 CYP2R1Q6VVX0 501 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 DHFR2Q86XF0 187 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 OR52H1Q8NGJ2 320 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 OR9Q1Q8NGQ5 310 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 OR2AE1Q8NHA4 323 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 TEX47Q8TBZ9 253 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 DGCR6LQ9BY27 220 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 ABCB9Q9NP78 766 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 SAMHD1Q9Y3Z3 626 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 POMT1Q9Y6A1 747 aa12.03□□□□□ -0.48
SMARCE1-209ENST00000478349 SRRM5B3KS81 715 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNF593O00488 134 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 SPI1P17947 270 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 NAA10P41227 235 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 RPS27P42677 84 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 GNGT1P63211 74 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 CRMP1Q14194 572 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 PCK2Q16822 640 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 MICBQ29980 383 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 OR2T5Q6IEZ7 315 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 LYPD2Q6UXB3 125 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 RHOUQ7L0Q8 258 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 CSNK2A3Q8NEV1 391 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 OR51L1Q8NGJ5 315 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 OR2T29Q8NH02 315 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 OR4F5Q8NH21 305 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 SPSB4Q96A44 273 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 LRGUKQ96M69 825 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 C1orf147Q96MC9 270 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 INTS14Q96SY0 518 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 RGCCQ9H4X1 137 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 RNPEPL1Q9HAU8 725 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 BEX1Q9HBH7 125 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ARL8BQ9NVJ2 186 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 MMP24Q9Y5R2 645 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 MGAM2Q2M2H8 2515 aa12.02□□□□□ -0.49
SMARCE1-209ENST00000478349 ANXA2P2A6NMY6 339 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms