RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 AKAP6Q13023 2319 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 hCG_38984A0A1B0GV85 526 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 A0A1B0GVI7 797 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 LOC107986453A0A1B0GWG9 222 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 CTAG2O75638 210 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 CLPTM1O96005 669 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 IGLV3-1P01715 115 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 CPEP16870 476 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 JUNBP17275 347 aaPredicted RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 CFL1P23528 166 aaKnown RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 GCH1P30793 250 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 MPV17P39210 176 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 FABP6P51161 128 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 PRSS12P56730 875 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 TPBGQ13641 420 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 TSTQ16762 297 aaKnown RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 MSMPQ1L6U9 139 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 SYT6Q5T7P8 510 aaPredicted RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 TMEM244Q5VVB8 128 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 LIPKQ5VXJ0 399 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 RDH10Q8IZV5 341 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 KLF14Q8TD94 323 aaPredicted RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 PGLYRP3Q96LB9 341 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 SOX7Q9BT81 388 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 REPIN1Q9BWE0 567 aaKnown RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 CISD1Q9NZ45 108 aaKnown RBP13.9□□□□□ -0.18
VHL-203ENST00000477538 FZR1Q9UM11 496 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
VHL-203ENST00000477538 A0A1B0GTI1 187 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 A0A1W2PPR1 153 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 VSTM5A8MXK1 200 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 H3BSH0 61 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 SYT7O43581 403 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 ISG15P05161 165 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 CD1AP06126 327 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 RAC2P15153 192 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 ZNF250P15622 560 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 ACHEP22303 614 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 CCL1P22362 96 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 GP2P55259 537 aaKnown RBP13.89□□□□□ -0.19
VHL-203ENST00000477538 FAM3AP98173 230 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 GPR50Q13585 617 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 ADIPOQQ15848 244 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 DOK3Q7L591 496 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 SYNPRQ8TBG9 265 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 GHSRQ92847 366 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 FBXW5Q969U6 566 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
VHL-203ENST00000477538 CMBLQ96DG6 245 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 FAM71F1Q96KD3 344 aaPredicted RBP13.89□□□□□ -0.19
VHL-203ENST00000477538 DHRS9Q9BPW9 319 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 HHLA2Q9UM44 414 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 ZNF281Q9Y2X9 895 aa13.89□□□□□ -0.19
VHL-203ENST00000477538 GGT3PA6NGU5 568 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 HS3ST1O14792 307 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 MTRF1O75570 445 aaKnown RBP13.88□□□□□ -0.19
VHL-203ENST00000477538 DHRS3O75911 302 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 OR4A8P0C604 315 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 GSK3AP49840 483 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
VHL-203ENST00000477538 TLE4Q04727 773 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 PSG7Q13046 419 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 ZNF295-AS1Q8N0V1 137 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 PLPP7Q8NBV4 271 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 OR10AC1Q8NH08 325 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 RGP1Q92546 391 aaPredicted RBP13.88□□□□□ -0.19
VHL-203ENST00000477538 HAVCR1Q96D42 359 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 SYT3Q9BQG1 590 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 MRPL37Q9BZE1 423 aaKnown RBP13.88□□□□□ -0.19
VHL-203ENST00000477538 DUSP13Q9UII6 198 aa13.88□□□□□ -0.19
VHL-203ENST00000477538 LOC390937A0A1W2PQ73 354 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 CCRL2O00421 344 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 SELEP16581 610 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 KITLGP21583 273 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 APOBEC3AP31941 199 aaPredicted RBP13.87□□□□□ -0.19
VHL-203ENST00000477538 LIPAP38571 399 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 MAP2K3P46734 347 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 SELENOVP59797 346 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 TNK1Q13470 666 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 OR8B8Q15620 311 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 SSX1Q16384 188 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 YIF1BQ5BJH7 314 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 TMEM255AQ5JRV8 349 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 OR2T2Q6IF00 324 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 TMEM200AQ86VY9 491 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 LRP11Q86VZ4 500 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 OR56B2PQ8NGI1 322 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 OR51A4Q8NGJ6 313 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 GPR148Q8TDV2 347 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 TSEN15Q8WW01 171 aaKnown RBP13.87□□□□□ -0.19
VHL-203ENST00000477538 C14orf79Q96F83 325 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 TMED9Q9BVK6 235 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 CLEC4MQ9H2X3 399 aaPredicted RBP13.87□□□□□ -0.19
VHL-203ENST00000477538 PLK3Q9H4B4 646 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 NDUFB11Q9NX14 153 aa13.87□□□□□ -0.19
VHL-203ENST00000477538 MYEF2Q9P2K5 600 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms