RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 UBE2UQ5VVX9 321 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SYPL2Q5VXT5 272 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MEDAGQ5VYS4 303 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TRIM40Q6P9F5 258 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CD200R1LQ6Q8B3 271 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 FAM131AQ6UXB0 335 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LRRN1Q6UXK5 716 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF782Q6ZMW2 699 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MBOAT2Q6ZWT7 520 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TMED4Q7Z7H5 227 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 AMIGO2Q86SJ2 522 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RBM23Q86U06 439 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ODF3L1Q8IXM7 274 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SVOPLQ8N434 492 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 C2orf73Q8N5S3 287 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LRRC52Q8N7C0 313 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF383Q8NA42 475 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ACBD4Q8NC06 268 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 KLHDC9Q8NEP7 349 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 OR5L1Q8NGL2 311 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 OR10Z1Q8NGY1 313 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CT45A3Q8NHU0 189 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RPLP0P6Q8NHW5 317 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SPPL2AQ8TCT8 520 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CASTOR1Q8WTX7 329 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 FAM222BQ8WU58 562 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TRUB1Q8WWH5 349 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 NDRG1Q92597 394 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CREB3L1Q96BA8 519 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SARAFQ96BY9 339 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 FLYWCH2Q96CP2 140 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SMIM19Q96E16 107 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 YIPF6Q96EC8 236 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SCMH1Q96GD3 660 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 POM121L2Q96KW2 1035 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MBOAT7Q96N66 472 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MS4A4EQ96PG1 132 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RHNO1Q9BSD3 238 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 AGMATQ9BSE5 352 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 WACQ9BTA9 647 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 HES7Q9BYE0 225 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 PLA2G2FQ9BZM2 168 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ARL6Q9H0F7 186 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TRABDQ9H4I3 376 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM38AQ9H6F2 299 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 UBE2ZQ9H832 354 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 ISYNA1Q9NPH2 558 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM9Q9P0T7 183 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MUTYHQ9UIF7 546 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 SAMD4AQ9UPU9 718 aaKnown RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 L3MBTL1Q9Y468 752 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 MMACHCQ9Y4U1 282 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 CACNG2Q9Y698 323 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 TICRRQ7Z2Z1 1910 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 COL11A2P13942 1736 aaPredicted RBP2.42□□□□□ -2.02
HMGN4-202ENST00000477243 RIC1Q4ADV7 1423 aa2.42□□□□□ -2.02
HMGN4-202ENST00000477243 LRP4O75096 1905 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 A0A0B4J2E0 115 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM272A0A1B0GTI8 110 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1B0GX12 115 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 OR2AT4A6NND4 320 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF724A8MTY0 619 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 KCNK1O00180 336 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 DFFAO00273 331 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF593O00488 134 aaPredicted RBP2.41□□□□□ -2.02
HMGN4-202ENST00000477243 LCE2BO14633 110 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 TGOLN2O43493 480 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 RGS14O43566 566 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SYNGR1O43759 233 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 PRKNO60260 465 aaPredicted RBP2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SLC16A7O60669 478 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 BCAR3O75815 825 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 CEACAM4O75871 244 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 DCTN3O75935 186 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 VAMP5O95183 116 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SNAPINO95295 136 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 MPZL1O95297 269 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SEC24AO95486 1093 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 ATP6V1G2O95670 118 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 LALBAP00709 142 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 IGHV4-39P01824 125 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 TCRBP04435 133 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 IFNA16P05015 189 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SNRPAP09012 282 aaKnown RBP2.41□□□□□ -2.02
HMGN4-202ENST00000477243 CCDC166P0CW27 439 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SLC2A1P11166 492 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 IDO1P14902 403 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 LIFP15018 202 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 IGFBP3P17936 291 aaPredicted RBP2.41□□□□□ -2.02
HMGN4-202ENST00000477243 CSNK2A2P19784 350 aaPredicted RBP2.41□□□□□ -2.02
HMGN4-202ENST00000477243 FCGR2CP31995 323 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 ARL2P36404 184 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 TGFBR2P37173 567 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 SOX3P41225 446 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 RFX2P48378 723 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 GPM6AP51674 278 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 STC1P52823 247 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 AP1S2P56377 157 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 PEX3P56589 373 aa2.41□□□□□ -2.02
HMGN4-202ENST00000477243 HILS1P60008 231 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms