RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 REEP6Q96HR9 211 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-210ENST00000473829 PPP1R3CQ9UQK1 317 aa15.97■□□□□ 0.15
PTCD3-210ENST00000473829 LMX1BO60663 402 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 IGHV2-70P01814 119 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 APOC1P02654 83 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 TIGD6Q17RP2 521 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 SLC35F2Q8IXU6 374 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 LINC01356Q8N9X3 169 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 OR8B12Q8NGG6 310 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 OR8J1Q8NGP2 316 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 EME1Q96AY2 570 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 TIMD4Q96H15 378 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 PGAM5Q96HS1 289 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 HRASLS5Q96KN8 279 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 OR8B4Q96RC9 309 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 ADAT1Q9BUB4 502 aaKnown RBP15.96■□□□□ 0.15
PTCD3-210ENST00000473829 OPA3Q9H6K4 179 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 ZNF665Q9H7R5 613 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 HAO2Q9NYQ3 351 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 ORC6Q9Y5N6 252 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 NPTNQ9Y639 398 aa15.96■□□□□ 0.15
PTCD3-210ENST00000473829 ANKRD65E5RJM6 399 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 MAGEB4O15481 346 aaPredicted RBP15.95■□□□□ 0.14
PTCD3-210ENST00000473829 APOL3O95236 402 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 IGHV2-5P01817 119 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 SBK2P0C263 348 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 PMELP40967 661 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 SRP9P49458 86 aaKnown RBP15.95■□□□□ 0.14
PTCD3-210ENST00000473829 RAD23AP54725 363 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 ROM1Q03395 351 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 SLC3A1Q07837 685 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 OR8G1Q15617 311 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 PRAMEF6Q5VXH4 476 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 MOGAT3Q86VF5 341 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 OR52H1Q8NGJ2 320 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 OR51G2Q8NGK0 314 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 LYZL4Q96KX0 146 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 C9orf16Q9BUW7 83 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 OR10A2Q9H208 303 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 PPP1R3EQ9H7J1 279 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 SP140LQ9H930 580 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 LPAR2Q9HBW0 351 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 FAM206AQ9NX38 181 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 MRPL15Q9P015 296 aaKnown RBP15.95■□□□□ 0.14
PTCD3-210ENST00000473829 KCNS2Q9ULS6 477 aa15.95■□□□□ 0.14
PTCD3-210ENST00000473829 ISPDA4D126 451 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM178BH3BS89 294 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 BAG2O95816 211 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 CYB5R3P00387 301 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-210ENST00000473829 HTR1FP30939 366 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 CD200P41217 278 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 CDC42P60953 191 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 CXCR4P61073 352 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 ZMYND11Q15326 602 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 MPPED2Q15777 294 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 KCTD18Q6PI47 426 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-210ENST00000473829 DEGS2Q6QHC5 323 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 IL17RELQ6ZVW7 336 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 SSX6Q7RTT6 188 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 PRIMA1Q86XR5 153 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 ASB17Q8WXJ9 295 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 GAL3ST1Q99999 423 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 NIPAL2Q9H841 368 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 CLN6Q9NWW5 311 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM160Q9NX00 188 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 WARS2Q9UGM6 360 aaKnown RBP15.94■□□□□ 0.14
PTCD3-210ENST00000473829 TMEM14AQ9Y6G1 99 aa15.94■□□□□ 0.14
PTCD3-210ENST00000473829 B4DSR2 109 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 GATA4P43694 442 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 GSK3AP49840 483 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 HOXA4Q00056 320 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-210ENST00000473829 MFGE8Q08431 387 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF322Q6U7Q0 402 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF679Q8IYX0 411 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 CELF2-AS1Q8N7Q2 184 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 STMN2Q93045 179 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 TBX5Q99593 518 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 APOL4Q9BPW4 351 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 MROQ9BYG7 248 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 IMPAD1Q9NX62 359 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 AASSQ9UDR5 926 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 IKZF2Q9UKS7 526 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 JMJD1CQ15652 2540 aa15.93■□□□□ 0.14
PTCD3-210ENST00000473829 GMDSO60547 372 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 SRSF10O75494 262 aaKnown RBP15.92■□□□□ 0.14
PTCD3-210ENST00000473829 ZNF205O95201 554 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 PNPP00491 289 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 MSMBP08118 114 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 ACKR3P25106 362 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 DDOSTP39656 456 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 BTG1P62324 171 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 OR8B8Q15620 311 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 FAM201AQ5SY85 155 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 PLEKHG7Q6ZR37 379 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 ZBTB49Q6ZSB9 765 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 PEG10Q86TG7 708 aaKnown RBP15.92■□□□□ 0.14
PTCD3-210ENST00000473829 PPP1R14AQ96A00 147 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 MNTQ99583 582 aa15.92■□□□□ 0.14
PTCD3-210ENST00000473829 SLC22A4Q9H015 551 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms