RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TMEM100Q9NV29 134 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 AASSQ9UDR5 926 aa12.87□□□□□ -0.35
SNX13-205ENST00000471744 MRM2Q9UI43 246 aaKnown RBP12.87□□□□□ -0.35
SNX13-205ENST00000471744 DYSFO75923 2080 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 LOC110117498-PIK3R3F6TDL0 507 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 J3QRE1 110 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 LY6HO94772 140 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 CLIC3O95833 236 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 TACSTD2P09758 323 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 FOSL1P15407 271 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 ACHEP22303 614 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 MAGEB1P43366 347 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 AQP4P55087 323 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 ACTA2P62736 377 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 ACTG2P63267 376 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 CCL8P80075 99 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 TNFAIP6P98066 277 aaPredicted RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 ZNF684Q5T5D7 378 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 OR8B12Q8NGG6 310 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 C10orf105Q8TEF2 133 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 SGK3Q96BR1 496 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 TTTY10Q9BZA0 68 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 MRPL15Q9P015 296 aaKnown RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 IL19Q9UHD0 177 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 NUFIP1Q9UHK0 495 aaKnown RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 RRP15Q9Y3B9 282 aaKnown RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 R4GMQ9 66 aa12.86□□□□□ -0.35
SNX13-205ENST00000471744 MAP1AP78559 2803 aaPredicted RBP12.86□□□□□ -0.35
SNX13-205ENST00000471744 hCG_38984A0A1B0GV85 526 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 A0A1B0GWJ7 208 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 NCR1O76036 304 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 IGHA1P01876 353 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 HPXP02790 462 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 CD99P14209 185 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 ATP6V1B1P15313 513 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 GIFP27352 417 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 FAM3AP98173 230 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 ZNF85Q03923 595 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 TNK1Q13470 666 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 CARTPTQ16568 116 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
SNX13-205ENST00000471744 Q6ZR03 302 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 THAP5Q7Z6K1 395 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 BHLHE23Q8NDY6 225 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 OR2Z1Q8NG97 314 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 OR56B2PQ8NGI1 322 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 CNIH3Q8TBE1 160 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 GTF3AQ92664 365 aaKnown RBP12.85□□□□□ -0.35
SNX13-205ENST00000471744 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 CHODLQ9H9P2 273 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 AMBNQ9NP70 447 aa12.85□□□□□ -0.35
SNX13-205ENST00000471744 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 ANKRD30BLA7E2S9 258 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 GMDSO60547 372 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
SNX13-205ENST00000471744 DCKP27707 260 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 CRYBB2P43320 205 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
SNX13-205ENST00000471744 TMEM33P57088 247 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 SLC3A1Q07837 685 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 MZT1Q08AG7 82 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 MED21Q13503 144 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 GALEQ14376 348 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 OR8B8Q15620 311 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 LURAP1LQ8IV03 231 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 CELF2-AS1Q8N7Q2 184 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 SPERTQ8NA61 448 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 HAVCR2Q8TDQ0 301 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 REG4Q9BYZ8 158 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 ABCB9Q9NP78 766 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 FGF20Q9NP95 211 aaPredicted RBP12.84□□□□□ -0.35
SNX13-205ENST00000471744 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 CR1P17927 2039 aa12.84□□□□□ -0.35
SNX13-205ENST00000471744 HIVEP1P15822 2718 aa12.83□□□□□ -0.35
SNX13-205ENST00000471744 ABCA1O95477 2261 aa12.83□□□□□ -0.35
SNX13-205ENST00000471744 IGHV4-30-2A0A087WSY4 118 aa12.83□□□□□ -0.36
SNX13-205ENST00000471744 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
SNX13-205ENST00000471744 TRIM64A6NGJ6 449 aa12.83□□□□□ -0.36
SNX13-205ENST00000471744 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
SNX13-205ENST00000471744 H7C1Q1 480 aa12.83□□□□□ -0.36
SNX13-205ENST00000471744 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms