RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SORT1Q99523 831 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C20orf85Q9H1P6 137 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UCK1Q9HA47 277 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 M0R3E3 92 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DUSP1P28562 367 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RGS7BPQ6MZT1 257 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NRARPQ7Z6K4 114 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PHF7Q9BWX1 381 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC17A4Q9Y2C5 497 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 AKAP11Q9UKA4 1901 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 H3BP45 60 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PSMB1P20618 241 aaKnown RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SULT1A1P50225 295 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PRSS35Q8N3Z0 413 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR5R1Q8NH85 324 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ANKRD60Q9BZ19 345 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GPR84Q9NQS5 396 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CLEC2DQ9UHP7 191 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ECM29Q5VYK3 1845 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ADAM10O14672 748 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ARR3P36575 388 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CSNK1G2P78368 415 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PMP22Q01453 160 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TAGLNQ01995 201 aaKnown RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NHLH1Q02575 133 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NHLH2Q02577 135 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ELAVL1Q15717 326 aaKnown RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LRRC10Q5BKY1 277 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C5orf46Q6UWT4 87 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DHRS13Q6UX07 377 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF788Q6ZQV5 615 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ERGIC1Q969X5 290 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TEX50A0A1B0GTY4 177 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FECHP22830 423 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF628Q5EBL2 1059 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SPPL3Q8TCT6 385 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLCO5A1Q9H2Y9 848 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MED29Q9NX70 200 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLC25A4P12235 298 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF260Q3ZCT1 412 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 WBP2Q969T9 261 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR5M11Q96RB7 305 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CHRDL1Q9BU40 450 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TRAPPC4Q9Y296 219 aa12.04□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SLCO2B1O94956 709 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ASCL1P50553 236 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UBE3DQ7Z6J8 389 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CCDC190Q86UF4 302 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MFSD4AQ8N468 514 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 TSLPQ969D9 159 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SEH1LQ96EE3 360 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FCRL1Q96LA6 429 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CNOT2Q9NZN8 540 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CSO75390 466 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 DAPP51397 102 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 PXT1Q8NFP0 134 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ALKBH3Q96Q83 286 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UQCC2Q9BRT2 126 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CSAG2Q9Y5P2 127 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 NFAT5O94916 1531 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ICOSLGO75144 302 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KIAA1024LP59773 190 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 KLHDC9Q8NEP7 349 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR10P1Q8NGE3 313 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CHAC2Q8WUX2 184 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SPAG8Q99932 426 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MS4A8Q9BY19 250 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 HDAC8Q9BY41 377 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 R4GN57 208 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 A0A087WV62 115 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 COX7A1P24310 79 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 HTRA4P83105 476 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LURAP1Q96LR2 239 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SYNGR2O43760 224 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 GPRIN2O60269 458 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SPINK4O60575 86 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SULT1A2P50226 295 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 LRRC56Q8IYG6 542 aaPredicted RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 OR2T11Q8NH01 316 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 SIAEQ9HAT2 523 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FGF22Q9HCT0 170 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ANKRD31Q8N7Z5 1873 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 CNMDO75829 334 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RRASP10301 218 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 APOBEC1P41238 236 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 RPL27P61353 136 aaKnown RBP12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 C19orf54Q5BKX5 351 aa12.03□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ARHGDIGQ99819 225 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms