RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 DDOSTP39656 456 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 OR12D2P58182 307 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 FAM3AP98173 230 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 MFGE8Q08431 387 aaPredicted RBP10.17□□□□□ -0.78
VPS13D-204ENST00000469054 GALEQ14376 348 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 TSTQ16762 297 aaKnown RBP10.17□□□□□ -0.78
VPS13D-204ENST00000469054 GFOD2Q3B7J2 385 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 CDONQ4KMG0 1287 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 TP53I3Q53FA7 332 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 DNM1P46Q6ZS02 220 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 FAM220AQ7Z4H9 259 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 LHFPL3Q86UP9 236 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 EGFL6Q8IUX8 553 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ZNF525Q8N782 197 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 BHLHE23Q8NDY6 225 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 OR56B2PQ8NGI1 322 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 OR13G1Q8NGZ3 307 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 UBASH3BQ8TF42 649 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 GGHQ92820 318 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 PPP1R14AQ96A00 147 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 MRPL48Q96GC5 212 aaKnown RBP10.17□□□□□ -0.78
VPS13D-204ENST00000469054 Q96MF0 132 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 SLC30A2Q9BRI3 323 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ZNF649Q9BS31 505 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ALG8Q9BVK2 526 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 JAM3Q9BX67 310 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ANKRD60Q9BZ19 345 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 MYOZ1Q9NP98 299 aaPredicted RBP10.17□□□□□ -0.78
VPS13D-204ENST00000469054 G6PC2Q9NQR9 355 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 DECR2Q9NUI1 292 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 TMEM100Q9NV29 134 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 NUFIP1Q9UHK0 495 aaKnown RBP10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ZNF391Q9UJN7 358 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 GNG8Q9UK08 70 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 OR52A1Q9UKL2 312 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 ZDHHC8Q9ULC8 765 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 SNX5Q9Y5X3 404 aa10.17□□□□□ -0.78
VPS13D-204ENST00000469054 A0A0U1RQV5 110 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 hCG_38984A0A1B0GV85 526 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 NCR1O76036 304 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CD55P08174 381 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CSF3P09919 207 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 DAOP14920 347 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 MYF6P23409 242 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 GSK3AP49840 483 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 PDLIM4P50479 330 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 DSCR9P59020 149 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ACTA2P62736 377 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ACTG2P63267 376 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CSNK2BP67870 215 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CCL8P80075 99 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 MRPS11P82912 194 aaKnown RBP10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CLEC2AQ6UVW9 174 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ELMOD2Q8IZ81 293 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ZNF786Q8N393 782 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 BPIFB6Q8NFQ5 453 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 OR2Z1Q8NG97 314 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 RORBQ92753 470 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ELMOD3Q96FG2 381 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 LYZL4Q96KX0 146 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 C4orf36Q96KX1 117 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 PLCXD1Q9NUJ7 323 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ACOXLQ9NUZ1 547 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ERVK13-1Q9NX77 482 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
VPS13D-204ENST00000469054 MRPL15Q9P015 296 aaKnown RBP10.16□□□□□ -0.78
VPS13D-204ENST00000469054 RAB26Q9ULW5 256 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 ARFGEF3Q5TH69 2177 aa10.16□□□□□ -0.78
VPS13D-204ENST00000469054 CREBBPQ92793 2442 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TACC2O95359 2948 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 ANKRD17O75179 2603 aaKnown RBP10.15□□□□□ -0.78
VPS13D-204ENST00000469054 A0A1B0GWJ7 208 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 LOC390937A0A1W2PQ73 354 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 EFCAB10A6NFE3 127 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 J3QLW9 94 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TPD52L2O43399 206 aaKnown RBP10.15□□□□□ -0.78
VPS13D-204ENST00000469054 XPNPEP2O43895 674 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TTRP02766 147 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 PIPP12273 146 aaPredicted RBP10.15□□□□□ -0.78
VPS13D-204ENST00000469054 ZNF19P17023 458 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TNFSF4P23510 183 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 COL8A2P25067 703 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 PSMB10P40306 273 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TNFAIP6P98066 277 aaPredicted RBP10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TNK1Q13470 666 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 OR8B8Q15620 311 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 C6orf141Q5SZD1 244 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 BCL2L15Q5TBC7 163 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 CATSPERDQ86XM0 798 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 SYS1Q8N2H4 156 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 CSNK2A3Q8NEV1 391 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 OR51E1Q8TCB6 317 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 FAM168AQ92567 244 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 RDH5Q92781 318 aa10.15□□□□□ -0.78
VPS13D-204ENST00000469054 TMEM80Q96HE8 168 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms