RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 YIPF3Q9GZM5 350 aa12.75□□□□□ -0.37
ATG4B-215ENST00000468018 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
ATG4B-215ENST00000468018 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
ATG4B-215ENST00000468018 POLR3KQ9Y2Y1 108 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-215ENST00000468018 DNHD1Q96M86 4753 aa12.75□□□□□ -0.37
ATG4B-215ENST00000468018 MXRA5Q9NR99 2828 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 EBAG9O00559 213 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PLPP2O43688 288 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 GMDSO60547 372 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 ANXA2P07355 339 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PCMT1P22061 227 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 POLR2IP36954 125 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 DDOSTP39656 456 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 MDH2P40926 338 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PSMA6P60900 246 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 RPS7P62081 194 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 OR8B8Q15620 311 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 LCN1P1Q5VSP4 162 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 ZFP1Q6P2D0 407 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 DEGS2Q6QHC5 323 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 KRT74Q7RTS7 529 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 BCDIN3DQ7Z5W3 292 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 SPRYD4Q8WW59 207 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PKP2Q99959 881 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 GAL3ST1Q99999 423 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 RGCCQ9H4X1 137 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 NIPAL2Q9H841 368 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 SP140LQ9H930 580 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PATZ1Q9HBE1 687 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 COPS3Q9UNS2 423 aa12.74□□□□□ -0.37
ATG4B-215ENST00000468018 NOP16Q9Y3C1 178 aaKnown RBP12.74□□□□□ -0.37
ATG4B-215ENST00000468018 PPIAL4EA0A075B759 164 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 PPIAL4CA0A0B4J2A2 164 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 A8MXK9 166 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 PPIAL4DF5H284 164 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 M0R129 80 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-215ENST00000468018 IFNA2P01563 188 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 ALPLP05186 524 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 H2BFMP0C1H6 154 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 PPIAL4FP0DN26 164 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 SRD5A1P18405 259 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 HNF1AP20823 631 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 CA6P23280 308 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 DCTDP32321 178 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 HCCSP53701 268 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 ROM1Q03395 351 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 C1orf229Q6ZS94 237 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-215ENST00000468018 FAM57BQ71RH2 274 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
ATG4B-215ENST00000468018 MOGAT3Q86VF5 341 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 KLBQ86Z14 1044 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 SPICQ8N5J4 248 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 THEM6Q8WUY1 208 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 REEP6Q96HR9 211 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 RBM4BQ9BQ04 359 aaKnown RBP12.73□□□□□ -0.37
ATG4B-215ENST00000468018 LPAR2Q9HBW0 351 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 ADGRL4Q9HBW9 690 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 USE1Q9NZ43 259 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 LRP12Q9Y561 859 aa12.73□□□□□ -0.37
ATG4B-215ENST00000468018 ISPDA4D126 451 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 SAC3D1A6NKF1 404 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 SLC22A31A6NKX4 558 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 TBX1O43435 398 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 SBK2P0C263 348 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 CFL1P23528 166 aaKnown RBP12.72□□□□□ -0.37
ATG4B-215ENST00000468018 CPT2P23786 658 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 MPPED2Q15777 294 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 MUC20Q8N307 709 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-215ENST00000468018 SPERTQ8NA61 448 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 LYZL4Q96KX0 146 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 OR8B4Q96RC9 309 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 MDFIQ99750 246 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 ADAT1Q9BUB4 502 aaKnown RBP12.72□□□□□ -0.37
ATG4B-215ENST00000468018 TMPRSS13Q9BYE2 586 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 OR10A2Q9H208 303 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 FAM206AQ9NX38 181 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
ATG4B-215ENST00000468018 FBN1P35555 2871 aaKnown RBP12.72□□□□□ -0.37
ATG4B-215ENST00000468018 IGHV3-64DA0A0J9YX35 117 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 ACOD1A6NK06 481 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 PNPP00491 289 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 AVPP01185 164 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 IGLV3-1P01715 115 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 ZFP36P26651 326 aaKnown RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 SEC61A1P61619 476 aaKnown RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 OR8G1Q15617 311 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms