RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF704Q6ZNC4 412 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SLC35D2Q76EJ3 337 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RRM2BQ7LG56 351 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 OR6V1Q8N148 313 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 DHRSXQ8N5I4 330 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 PRR26Q8N8Z3 221 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SCAIQ8N9R8 606 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 ADPRHL1Q8NDY3 354 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 LILRB1Q8NHL6 650 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 FGFBP3Q8TAT2 258 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 DNAJC9Q8WXX5 260 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 POP5Q969H6 163 aaKnown RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 CNBD2Q96M20 576 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 OR2M2Q96R28 347 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 AMELYQ99218 206 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF184Q99676 751 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MED18Q9BUE0 208 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 MRPL13Q9BYD1 178 aaKnown RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 ANKRD60Q9BZ19 345 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 TTTY10Q9BZA0 68 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 NMNAT2Q9BZQ4 307 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SYT4Q9H2B2 425 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 RNF122Q9H9V4 155 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 NOX3Q9HBY0 568 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 SEPSECSQ9HD40 501 aaKnown RBP3.1□□□□□ -1.91
SCFD1-204ENST00000463622 FANCFQ9NPI8 374 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 INIPQ9NRY2 104 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 KLHDC2Q9Y2U9 406 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 UGT2A1Q9Y4X1 527 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
SCFD1-204ENST00000463622 IGKV3D-15A0A087WSY6 115 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TVP23AA6NH52 213 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SLC22A20A6NK97 555 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ARPC3O15145 178 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 OR2T1O43869 369 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SELENOFO60613 162 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SS18L1O75177 396 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 IGHV4-39P01824 125 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SOD3P08294 240 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 MRPL3P09001 348 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 PATE4P0C8F1 98 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 GSTM3P21266 225 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 MYF6P23409 242 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 GTF2E2P29084 291 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SLC6A6P31641 620 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ACVR1BP36896 505 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 CLK1P49759 484 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ARHGDIAP52565 204 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 RAD23AP54725 363 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 RPL27P61353 136 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ESRRGP62508 458 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TUBA1BP68363 451 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 IL5RAQ01344 420 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 RASGEF1BQ0VAM2 473 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 COX10Q12887 443 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ITGADQ13349 1161 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 HIST3H3Q16695 136 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 LIPNQ5VXI9 398 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM225Q6GV28 225 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SLC27A4Q6P1M0 643 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 NIPAL3Q6P499 406 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 LEG1Q6P5S2 330 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 C5orf46Q6UWT4 87 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TFAP2EQ6VUC0 442 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 DPY19L2P2Q6ZN68 376 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 C18orf65Q6ZTR6 163 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TUBA1AQ71U36 451 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SSX6Q7RTT6 188 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 PXKQ7Z7A4 578 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 CPOQ8IVL8 374 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ARIH2OSQ8N7S6 290 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 NOXO1Q8NFA2 376 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 OR2T33Q8NG76 320 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SGMS2Q8NHU3 365 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 RHOXF1Q8NHV9 184 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TEX47Q8TBZ9 253 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TMEM54Q969K7 222 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 CPNE4Q96A23 557 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ZMYND19Q96E35 227 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF582Q96NG8 517 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 OXGR1Q96P68 337 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF649Q9BS31 505 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 OPN3Q9H1Y3 402 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 TXNIPQ9H3M7 391 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF556Q9HAH1 456 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 RPRD1BQ9NQG5 326 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 CMC2Q9NRP2 79 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SLC7A10Q9NS82 523 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 MRPL22Q9NWU5 206 aaKnown RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 COPS3Q9UNS2 423 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 B3GALT5Q9Y2C3 310 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 LRRC42Q9Y546 428 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 SPIN1Q9Y657 262 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-204ENST00000463622 ALPK2Q86TB3 2170 aa3.09□□□□□ -1.91
SCFD1-204ENST00000463622 LOC102725191A0A1B0GVB3 256 aa3.09□□□□□ -1.92
SCFD1-204ENST00000463622 A0A1W2PR80 420 aa3.09□□□□□ -1.92
SCFD1-204ENST00000463622 PRSS37A4D1T9 235 aa3.09□□□□□ -1.92
SCFD1-204ENST00000463622 C5orf63A6NC05 138 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms