RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 RPS2P15880 293 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 PAICSP22234 425 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 CFL1P23528 166 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 GSTT1P30711 240 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 RBMXP38159 391 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 PSMB10P40306 273 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 NPY4RP50391 375 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SEC61A1P61619 476 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 PAX2Q02962 417 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 HNRNPA0Q13151 305 aaKnown RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 MPPED2Q15777 294 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SNCBQ16143 134 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 C11orf91Q3C1V1 193 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SNAI3Q3KNW1 292 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ARMCX4Q5H9R4 360 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 GLYATL3Q5SZD4 288 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 LINC01590Q5TEZ4 76 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 CD276Q5ZPR3 534 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 LYPD4Q6UWN0 246 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 DCDC5Q6ZRR9 648 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 DOK3Q7L591 496 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 TRPM8Q7Z2W7 1104 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ADGRG5Q8IZF4 528 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ZDHHC22Q8N966 263 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 OR8B3Q8NGG8 313 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 OR52H1Q8NGJ2 320 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 OR6K6Q8NGW6 343 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 TEX47Q8TBZ9 253 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SGK3Q96BR1 496 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 CLPTM1LQ96KA5 538 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 OR8B2Q96RD0 313 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 INTS14Q96SY0 518 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 SLC6A7Q99884 636 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 NIPSNAP1Q9BPW8 284 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 MARCH7Q9H992 704 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 ZNF556Q9HAH1 456 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 UFSP2Q9NUQ7 469 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 C14orf119Q9NWQ9 140 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 PDP1Q9P0J1 537 aaPredicted RBP6.09□□□□□ -1.43
PTPRF-210ENST00000463041 N6AMT1Q9Y5N5 214 aa6.09□□□□□ -1.43
PTPRF-210ENST00000463041 TRAV38-1A0A0B4J264 116 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 IGHV2-70DA0A0C4DH43 119 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 IGHV3-64DA0A0J9YX35 117 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ANKRD30BLA7E2S9 258 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PRR23D1E9PI22 279 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 LGALS8O00214 317 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PHYHO14832 338 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TNFRSF13BO14836 293 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 RGS9O75916 674 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 GRPP07492 148 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PRR23D2P0DMB1 279 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PSKH1P11801 424 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OSMP13725 252 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PRTN3P24158 256 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 POU1F1P28069 291 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 HSD11B1P28845 292 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 MTNR1AP48039 350 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PITPNBP48739 271 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PRSS12P56730 875 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 BPIFB3P59826 476 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ACTG1P63261 375 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 FAM3AP98173 230 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 CDK5Q00535 292 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 EIF2B1Q14232 305 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 GINS1Q14691 196 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 DNAL1Q4LDG9 190 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PRAMEF6Q5VXH4 476 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 WDR25Q64LD2 544 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF841Q6ZN19 808 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 DPY19L4Q7Z388 723 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TMEM179BQ7Z7N9 219 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ERI1Q8IV48 349 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TIGD4Q8IY51 512 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ZNF454Q8N9F8 522 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 PAPD5Q8NDF8 572 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OR6N2Q8NGY6 317 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OR2AE1Q8NHA4 323 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 BCAS4Q8TDM0 211 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 RNF133Q8WVZ7 376 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 C22orf15Q8WYQ4 148 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ITFG2Q969R8 447 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 DACT3Q96B18 629 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OTULINQ96BN8 352 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 UPRTQ96BW1 309 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 CCDC124Q96CT7 223 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 NRBF2Q96F24 287 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ADAT1Q9BUB4 502 aaKnown RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ABHD6Q9BV23 337 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 TEX12Q9BXU0 123 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 MS4A7Q9GZW8 240 aaPredicted RBP6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OR10A2Q9H208 303 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 OR51V1Q9H2C8 321 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 MED20Q9H944 212 aa6.08□□□□□ -1.44
PTPRF-210ENST00000463041 ZMAT3Q9HA38 289 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms