RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 HIST1H2AAQ96QV6 131 aa9.12□□□□□ -0.95
UBR4-208ENST00000459947 MYEF2Q9P2K5 600 aaKnown RBP9.12□□□□□ -0.95
UBR4-208ENST00000459947 UBCP0CG48 685 aaKnown RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 MYL12AP19105 171 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 USF1P22415 310 aaPredicted RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 RPS27P42677 84 aaKnown RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 GATA4P43694 442 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 OR8B8Q15620 311 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 KCNJ8Q15842 424 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 CDONQ4KMG0 1287 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 OR2T2Q6IF00 324 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 SPATC1Q76KD6 591 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 DOK3Q7L591 496 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 KRT74Q7RTS7 529 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 MUC20Q8N307 709 aaPredicted RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 RAB39BQ96DA2 213 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 ANKRD17O75179 2603 aaKnown RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 hCG_38984A0A1B0GV85 526 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 ZSCAN5BA6NJL1 495 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 TMEM210A6NLX4 147 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 CST4P01036 141 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 NAT2P11245 290 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 NR4A2P43354 598 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 CCR9P51686 369 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 TMEM244Q5VVB8 128 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 PBOV1Q9GZY1 135 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 TPK1Q9H3S4 243 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 PLCXD1Q9NUJ7 323 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 FAM206AQ9NX38 181 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 PRRC2AP48634 2157 aaKnown RBP9.11□□□□□ -0.95
UBR4-208ENST00000459947 A0A1B0GVI7 797 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 VWC2LB2RUY7 222 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 SPRY3O43610 288 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 IGHA1P01876 353 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 OTPQ5XKR4 325 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 PRSS45Q7RTY3 260 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 ELMOD2Q8IZ81 293 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 THRSPQ92748 146 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 RTL8AQ9BWD3 113 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 FN3KRPQ9HA64 309 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 ENPP5Q9UJA9 477 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 OR52A1Q9UKL2 312 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 KLHDC2Q9Y2U9 406 aa9.11□□□□□ -0.95
UBR4-208ENST00000459947 ZNF816-ZNF321PA0A0X1KG74 233 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 M0R129 80 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 INHBBP09529 407 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 CDH15P55291 814 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 RIPPLY1Q0D2K3 151 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 CARTPTQ16568 116 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 LRRC36Q1X8D7 754 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 OR2Z1Q8NG97 314 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 LGALS12Q96DT0 336 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 POFUT1Q9H488 388 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 COPS3Q9UNS2 423 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 PLCE1Q9P212 2302 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 ANKRD65E5RJM6 399 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 HTR1AP08908 422 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 PSKH1P11801 424 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 VHLP40337 213 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 GSK3AP49840 483 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 GBX2P52951 348 aaPredicted RBP9.1□□□□□ -0.95
UBR4-208ENST00000459947 ZNF92Q03936 586 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 TNK1Q13470 666 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 GALEQ14376 348 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 TSTQ16762 297 aaKnown RBP9.1□□□□□ -0.95
UBR4-208ENST00000459947 OR8B12Q8NGG6 310 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 OR56B2PQ8NGI1 322 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 Q8TCH9 128 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 SGK3Q96BR1 496 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 AMELYQ99218 206 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 ADAT1Q9BUB4 502 aaKnown RBP9.1□□□□□ -0.95
UBR4-208ENST00000459947 ARFGEF3Q5TH69 2177 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 H7C1Q1 480 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 SNAI3Q3KNW1 292 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 SPICQ8N5J4 248 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 OR8S1Q8NH09 359 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 BLOC1S6Q9UL45 172 aa9.1□□□□□ -0.95
UBR4-208ENST00000459947 CAB39Q9Y376 341 aaPredicted RBP9.1□□□□□ -0.95
UBR4-208ENST00000459947 A0A1W2PQL4 384 aaPredicted RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 ATP6V1G2O95670 118 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 PTBP3O95758 552 aaKnown RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 TAS2R43P59537 309 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 FAM3AP98173 230 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 Q6ZSR3 168 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 COMMD2Q86X83 199 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 SEMA6DQ8NFY4 1073 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 TFAP2CQ92754 450 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 MRM2Q9UI43 246 aaKnown RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 DIMT1Q9UNQ2 313 aaKnown RBP9.09□□□□□ -0.95
UBR4-208ENST00000459947 SLC22A13Q9Y226 551 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 OR5B21A6NL26 309 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 DLGAP1O14490 977 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 DHRS3O75911 302 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 TMEM155Q4W5P6 130 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 CATSPERDQ86XM0 798 aa9.09□□□□□ -0.95
UBR4-208ENST00000459947 KLHL36Q8N4N3 616 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms