RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C5orf46Q6UWT4 87 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF546Q86UE3 836 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 TMEM104Q8NE00 496 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 NFAM1Q8NET5 270 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OR2M3Q8NG83 312 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OR8B12Q8NGG6 310 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OR4K15Q8NH41 348 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 HAVCR2Q8TDQ0 301 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SEH1LQ96EE3 360 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 KCNK17Q96T54 332 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-213ENST00000454468 PIGLQ9Y2B2 252 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 A0A1B0GUH1 482 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 FTCDNL1E5RQL4 147 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SLC33A1O00400 549 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-213ENST00000454468 NPIPB7O75200 414 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OR4E1P0C645 316 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 CARD18P57730 90 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 FXYD4P59646 89 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ESCO2Q56NI9 601 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 MARCH1Q8TCQ1 289 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 CYYR1Q96J86 154 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 GLTPQ9NZD2 209 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 NUP50Q9UKX7 468 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 R4GN57 208 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 F5H0A9 414 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 HSPB6O14558 160 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 SOCS1O15524 211 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 GSTZ1O43708 216 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 IFI6P09912 130 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 DCAF12Q5T6F0 453 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 SPINK14Q6IE38 97 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 WDSUB1Q8N9V3 476 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 BHLHE23Q8NDY6 225 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 LIPHQ8WWY8 451 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 TRBV5-7A0A0A0MS05 114 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 CER1O95813 267 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 HOXB5P09067 269 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 MSX1P28360 303 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 CBX5P45973 191 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 RAP2BP61225 183 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 UNQ6126/PRO20091Q6UXV3 157 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 POC1BQ8TC44 478 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 ST8SIA4Q92187 359 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF837Q96EG3 531 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 NAA11Q9BSU3 229 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 PRMT8Q9NR22 394 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 OR2AT4A6NND4 320 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 GAAP10253 952 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 HTR5AP47898 357 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 MTCP1P56278 107 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 RAB11FIP2Q7L804 512 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 AAED1Q7RTV5 226 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 ST7LQ8TDW4 575 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 PIGCQ92535 297 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 THOC3Q96J01 351 aaKnown RBP10.61□□□□□ -0.71
SMPD4-213ENST00000454468 IER2Q9BTL4 223 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 CALHM2Q9HA72 323 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 CRLF2Q9HC73 371 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 PILRBQ9UKJ0 227 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 HS3ST3B1Q9Y662 390 aa10.61□□□□□ -0.71
SMPD4-213ENST00000454468 LGALS8O00214 317 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 CCL2P13500 99 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF250P15622 560 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 NAGAP17050 411 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 OPRM1P35372 400 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ZBTB44Q8NCP5 570 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
SMPD4-213ENST00000454468 G6PC2Q9NQR9 355 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 PLEKHJ1Q9NW61 149 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 LHFPL6Q9Y693 200 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 TEX13DA0A0J9YY54 714 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-213ENST00000454468 C5orf63A6NC05 138 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 SPRY1O43609 319 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ERCC1P07992 297 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-213ENST00000454468 CAPZA1P52907 286 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 CHRFAM7AQ494W8 412 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF441Q8N8Z8 693 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 OR5T2Q8NGG2 359 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 THAP6Q8TBB0 222 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 RNF133Q8WVZ7 376 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 LOXL2Q9Y4K0 774 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 PCDHGA1Q9Y5H4 931 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 SESN1Q9Y6P5 492 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 TMEM200CA6NKL6 621 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 SERPINA5P05154 406 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 VSIG8P0DPA2 414 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 CD96P40200 585 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 EIF1P41567 113 aaKnown RBP10.6□□□□□ -0.71
SMPD4-213ENST00000454468 TAF9Q16594 264 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 BIVMQ86UB2 503 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 MCEMP1Q8IX19 187 aa10.6□□□□□ -0.71
SMPD4-213ENST00000454468 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms