RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
NCKIPSD-207ENST00000453349 A0A0U1RQV5 110 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 CD300LBA8K4G0 201 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 PTGES3LE9PB15 166 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 TNFSF4P23510 183 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 FAM3AP98173 230 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 MFGE8Q08431 387 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 MRPL28Q13084 256 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 TSTQ16762 297 aaKnown RBP12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 BHLHE23Q8NDY6 225 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 HAVCR2Q8TDQ0 301 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 RORBQ92753 470 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 ITFG2Q969R8 447 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 PPP1R14AQ96A00 147 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 G6PC2Q9NQR9 355 aa12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 CAB39Q9Y376 341 aaPredicted RBP12.46□□□□□ -0.41
NCKIPSD-207ENST00000453349 ANKRD30BLA7E2S9 258 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 SLC1A7O00341 560 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 DENRO43583 198 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 MTRF1O75570 445 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 IGHV1-46P01743 117 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 TTRP02766 147 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 HTR1AP08908 422 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 ANOS1P23352 680 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 PSMB10P40306 273 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 MAGEB1P43366 347 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 MAP2K3P46734 347 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 GSK3AP49840 483 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 ETV1P50549 477 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 GBX2P52951 348 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 PRSS12P56730 875 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 CCL8P80075 99 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 FAM209AQ5JX71 171 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 AHSA2Q719I0 299 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 CATSPERDQ86XM0 798 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 KLHL36Q8N4N3 616 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 OR2Z1Q8NG97 314 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 OR51E1Q8TCB6 317 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 GTF3AQ92664 365 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 SLC30A2Q9BRI3 323 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 EGLN1Q9GZT9 426 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 SLC22A4Q9H015 551 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 ISG20L2Q9H9L3 353 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 MYOZ1Q9NP98 299 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 ACOXLQ9NUZ1 547 aa12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 HRNRQ86YZ3 2850 aaPredicted RBP12.45□□□□□ -0.42
NCKIPSD-207ENST00000453349 hCG_38984A0A1B0GV85 526 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 ZSCAN5BA6NJL1 495 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 GMDSO60547 372 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 ADH4P08319 380 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 CCDC159P0C7I6 412 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 DAOP14920 347 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 DSCR9P59020 149 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 TNFAIP6P98066 277 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 CLEC12BQ2HXU8 276 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 Q5PR19 223 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 RBM48Q5RL73 367 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 FDX2Q6P4F2 183 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 Q6ZR03 302 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 FTMTQ8N4E7 242 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 CSNK2A3Q8NEV1 391 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 OR56B2PQ8NGI1 322 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 UBASH3BQ8TF42 649 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 PELI1Q96FA3 418 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 ELMOD3Q96FG2 381 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 ZNF649Q9BS31 505 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 MRPL15Q9P015 296 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 SLC22A13Q9Y226 551 aa12.44□□□□□ -0.42
NCKIPSD-207ENST00000453349 CADP27708 2225 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 LRBAP50851 2863 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 CD55P08174 381 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 CSF3P09919 207 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 CA6P23280 308 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 PDLIM4P50479 330 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 CCR9P51686 369 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 MVKQ03426 396 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 ALKBH1Q13686 389 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 OR8G1Q15617 311 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 ODF4Q2M2E3 257 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 ZNF786Q8N393 782 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 SEMA6DQ8NFY4 1073 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 OR2G2Q8NGZ5 317 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 RDH5Q92781 318 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 FAM71F1Q96KD3 344 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 SAP30LQ9HAJ7 183 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 GPR84Q9NQS5 396 aa12.43□□□□□ -0.42
NCKIPSD-207ENST00000453349 FKBP14Q9NWM8 211 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms