RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.58□□□□□ -1.2
COL8A1-203ENST00000452013 N6AMT1Q9Y5N5 214 aa7.58□□□□□ -1.2
COL8A1-203ENST00000452013 FREM1Q5H8C1 2179 aa7.58□□□□□ -1.2
COL8A1-203ENST00000452013 CACNA1DQ01668 2161 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ITPR2Q14571 2701 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 GGT3PA6NGU5 568 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ACOD1A6NK06 481 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 RNF223E7ERA6 249 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 M0R129 80 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 SMAD7O15105 426 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 XRCC2O43543 280 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 LY6HO94772 140 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 IGHV1-46P01743 117 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 HPXP02790 462 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ANXA2P07355 339 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ADH4P08319 380 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 MRPL3P09001 348 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 SBK2P0C263 348 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR2T7P0C7T2 308 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 PSKH1P11801 424 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ACHEP22303 614 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 CFL1P23528 166 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 DCTDP32321 178 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 DDOSTP39656 456 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 CRYBB2P43320 205 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 MAGEB1P43366 347 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 CX3CR1P49238 355 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 HCCSP53701 268 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 CCL8P80075 99 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 EMX1Q04741 257 aaPredicted RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 GK2Q14410 553 aaPredicted RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 HLXQ14774 488 aaPredicted RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 TBCEQ15813 527 aaPredicted RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OCLNQ16625 522 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 TSTQ16762 297 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 TIMM50Q3ZCQ8 353 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 UBE2UQ5VVX9 321 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR2T2Q6IF00 324 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 BIVMQ86UB2 503 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 SLC35F2Q8IXU6 374 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR8G5Q8NG78 346 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR52H1Q8NGJ2 320 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR2T27Q8NH04 317 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 SPRYD4Q8WW59 207 aaPredicted RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ITFG2Q969R8 447 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 YIPF6Q96EC8 236 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ELMOD3Q96FG2 381 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 PGAM5Q96HS1 289 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 DCUN1D5Q9BTE7 237 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 SLC22A4Q9H015 551 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 OR10A2Q9H208 303 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 TMEM100Q9NV29 134 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 CLN6Q9NWW5 311 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 ERGIC3Q9Y282 383 aa7.57□□□□□ -1.2
COL8A1-203ENST00000452013 NOP16Q9Y3C1 178 aaKnown RBP7.57□□□□□ -1.2
COL8A1-203ENST00000452013 MPDZO75970 2070 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 IGHV4-30-2A0A087WSY4 118 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ISPDA4D126 451 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ZSCAN5BA6NJL1 495 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 IQCF6A8MYZ5 107 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 TBX1O43435 398 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 CD55P08174 381 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF182P17025 639 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 USF1P22415 310 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 COL8A2P25067 703 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 GIFP27352 417 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 CD40LGP29965 261 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 NR4A2P43354 598 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 BMXP51813 675 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 RIDAP52758 137 aaKnown RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF121P58317 390 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 TNFAIP6P98066 277 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ROM1Q03395 351 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 EGR3Q06889 387 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 SLC3A1Q07837 685 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 LOXL1Q08397 574 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 CTF1Q16619 201 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 TIGD6Q17RP2 521 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 HFEQ30201 348 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF322Q6U7Q0 402 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 LRRN1Q6UXK5 716 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 FAM57BQ71RH2 274 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 ZNF679Q8IYX0 411 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 OR5AS1Q8N127 324 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 CIARTQ8N365 385 aaPredicted RBP7.56□□□□□ -1.2
COL8A1-203ENST00000452013 BPIFB6Q8NFQ5 453 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 OR2Z1Q8NG97 314 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 OR51G2Q8NGK0 314 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 RHOXF1Q8NHV9 184 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 UBE2FQ969M7 185 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 SGK3Q96BR1 496 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 SIGLEC11Q96RL6 698 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 AMELYQ99218 206 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 RGCCQ9H4X1 137 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 OCEL1Q9H607 264 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 CHODLQ9H9P2 273 aa7.56□□□□□ -1.2
COL8A1-203ENST00000452013 SAP30LQ9HAJ7 183 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms