RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 hCG_1807616A0A1W2PRN6 198 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 PSMB11A5LHX3 300 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 TMEM247A6NEH6 219 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 NPIPB13A6NJU9 1138 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 NPIPB4C9JG80 1138 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 HIST1H2ABP04908 130 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 LPLP06858 475 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 FGF4P08620 206 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 DUX4L4P0CJ87 422 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 BGNP21810 368 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 MTNR1BP49286 362 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 CEBPDP49716 269 aaPredicted RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 RAB13P51153 203 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 FMODQ06828 376 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 OR8G1Q15617 311 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ZNF74Q16587 644 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 UGT3A2Q3SY77 523 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ZNF260Q3ZCT1 412 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 PLBD1Q6P4A8 553 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 FOXL2NBQ6ZUU3 175 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 HIST3H2AQ7L7L0 130 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 NANOGNBQ7Z5D8 188 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 RANBP3LQ86VV4 465 aaPredicted RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ZNF695Q8IW36 515 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 SLC35F6Q8N357 371 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 RPP25LQ8N5L8 163 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 OR8U1Q8NH10 309 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ACMSDQ8TDX5 336 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 CAPSLQ8WWF8 208 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 HIST1H2ACQ93077 130 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 TESCQ96BS2 214 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 MALSU1Q96EH3 234 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 DUS3LQ96G46 650 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ITCHQ96J02 903 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 LYZL4Q96KX0 146 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ADAT1Q9BUB4 502 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 DNTTIP1Q9H147 329 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 TMEM27Q9HBJ8 222 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 C1orf123Q9NWV4 160 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 THUMPD1Q9NXG2 353 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 ASIC5Q9NY37 505 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 VNN3Q9NY84 501 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 PPP2R2CQ9Y2T4 447 aa6.22□□□□□ -1.41
LINC01961-201ENST00000449954 UTP11Q9Y3A2 253 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 TBL2Q9Y4P3 447 aaKnown RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 SIRT4Q9Y6E7 314 aaPredicted RBP6.22□□□□□ -1.41
LINC01961-201ENST00000449954 IGHV3OR15-7A0A075B7D8 119 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 CCDC154A6NI56 674 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 A6NLC8 198 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 GMDSO60547 372 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 FMO6PO60774 539 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 KRT75O95678 551 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
LINC01961-201ENST00000449954 ASAH2BP0C7U1 165 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 PGA5P0DJD9 388 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 PRKAR1BP31321 381 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 TGM4P49221 684 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 CAV3P56539 151 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 MZT1Q08AG7 82 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 LRRC74AQ0VAA2 488 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 PCK2Q16822 640 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 ATPAF1Q5TC12 328 aaPredicted RBP6.21□□□□□ -1.42
LINC01961-201ENST00000449954 SLC25A47Q6Q0C1 308 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 ZDHHC24Q6UX98 284 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 LHFPL4Q7Z7J7 247 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 SPC24Q8NBT2 197 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 OR9Q1Q8NGQ5 310 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 OR4Q3Q8NH05 313 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 OR5K1Q8NHB7 308 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 SLC38A5Q8WUX1 472 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 RNFT2Q96EX2 444 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 TMEM19Q96HH6 336 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 RAX2Q96IS3 184 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 PANX1Q96RD7 426 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 NINJ2Q9NZG7 142 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 BTNL2Q9UIR0 455 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 LRP12Q9Y561 859 aa6.21□□□□□ -1.42
LINC01961-201ENST00000449954 VPS13DQ5THJ4 4388 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 hCG_1809904A0A1W2PP81 198 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 A0A1W2PPE2 198 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 A0A1W2PPH5 198 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 A0A1W2PPL8 197 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 A0A1W2PR64 198 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 A0A1W2PRV1 198 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 OR6C6A6NF89 314 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 TMEM233B4DJY2 109 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 ACOT8O14734 319 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 CH25HO95992 272 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 C1QCP02747 245 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 UMPSP11172 480 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 PTMSP20962 102 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 GRK5P34947 590 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 PAFAH1B1P43034 410 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 UGT2B15P54855 530 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 SLURP1P55000 103 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 DSTNP60981 165 aa6.2□□□□□ -1.42
LINC01961-201ENST00000449954 MRPS25P82663 173 aaKnown RBP6.2□□□□□ -1.42
LINC01961-201ENST00000449954 EMX2Q04743 252 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms