RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SPSB4Q96A44 273 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 TIMD4Q96H15 378 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 C9orf16Q9BUW7 83 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 ORC6Q9Y5N6 252 aa12.52□□□□□ -0.41
HDAC4-204ENST00000446876 hCG_38984A0A1B0GV85 526 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 A0A1B0GWJ7 208 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 LMX1BO60663 402 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 CRLF1O75462 422 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 APOC1P02654 83 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 SRP9P49458 86 aaKnown RBP12.51□□□□□ -0.41
HDAC4-204ENST00000446876 RAD23AP54725 363 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 FAM3AP98173 230 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 MAB21L1Q13394 359 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 OR8G1Q15617 311 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 RHOUQ7L0Q8 258 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 LINC01356Q8N9X3 169 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 RAB1CQ92928 201 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 STMN2Q93045 179 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 EME1Q96AY2 570 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 OR8B4Q96RC9 309 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 TBX5Q99593 518 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 ADAT1Q9BUB4 502 aaKnown RBP12.51□□□□□ -0.41
HDAC4-204ENST00000446876 OR10A2Q9H208 303 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF665Q9H7R5 613 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 AASSQ9UDR5 926 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 IKZF2Q9UKS7 526 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 KCNS2Q9ULS6 477 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
HDAC4-204ENST00000446876 E9PQ18 207 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF205O95201 554 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-204ENST00000446876 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 SBK2P0C263 348 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 HTR1FP30939 366 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 PMELP40967 661 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 CDC42P60953 191 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 CXCR4P61073 352 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 HOXA4Q00056 320 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-204ENST00000446876 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 MFGE8Q08431 387 aaPredicted RBP12.5□□□□□ -0.41
HDAC4-204ENST00000446876 PLEKHG7Q6ZR37 379 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 SSX6Q7RTT6 188 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 OR52H1Q8NGJ2 320 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 OR8J1Q8NGP2 316 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 C1orf159Q96HA4 380 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 HRASLS5Q96KN8 279 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 LYZL4Q96KX0 146 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 GAL3ST1Q99999 423 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 APOL4Q9BPW4 351 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 PPP1R3EQ9H7J1 279 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 SP140LQ9H930 580 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 UFSP2Q9NUQ7 469 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 UBAP1Q9NZ09 502 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 ARHGAP32A7KAX9 2087 aa12.5□□□□□ -0.41
HDAC4-204ENST00000446876 TMEM178BH3BS89 294 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 IGHV2-5P01817 119 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 CD200P41217 278 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 GSK3AP49840 483 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ROM1Q03395 351 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ZMYND11Q15326 602 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 MPPED2Q15777 294 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 FAM201AQ5SY85 155 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 KCTD18Q6PI47 426 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF322Q6U7Q0 402 aaPredicted RBP12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ZBTB49Q6ZSB9 765 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 PEG10Q86TG7 708 aaKnown RBP12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 ASB17Q8WXJ9 295 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 PPP1R14AQ96A00 147 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 MROQ9BYG7 248 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 OPA3Q9H6K4 179 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 NIPAL2Q9H841 368 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 CLN6Q9NWW5 311 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 FAM206AQ9NX38 181 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 HAO2Q9NYQ3 351 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
HDAC4-204ENST00000446876 WARS2Q9UGM6 360 aaKnown RBP12.49□□□□□ -0.41
HDAC4-204ENST00000446876 TMEM14AQ9Y6G1 99 aa12.49□□□□□ -0.41
HDAC4-204ENST00000446876 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 ZNF670-ZNF695F2Z2N8 137 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 FAM20BO75063 409 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 ENTPD6O75354 484 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 PNPP00491 289 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 ACKR3P25106 362 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 RIDAP52758 137 aaKnown RBP12.48□□□□□ -0.41
HDAC4-204ENST00000446876 BTG1P62324 171 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 RCN1Q15293 331 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 ZSCAN26Q16670 478 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 PRIMA1Q86XR5 153 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 MRM2Q9UI43 246 aaKnown RBP12.48□□□□□ -0.41
HDAC4-204ENST00000446876 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 RHBDD3Q9Y3P4 386 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 GMPPBQ9Y5P6 360 aa12.48□□□□□ -0.41
HDAC4-204ENST00000446876 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms