RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 REPIN1Q9BWE0 567 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
SSBP3-208ENST00000444533 MRPS18AQ9NVS2 196 aaKnown RBP12.04□□□□□ -0.48
SSBP3-208ENST00000444533 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 LOC390937A0A1W2PQ73 354 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 J3QLW9 94 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 NDUFS8O00217 210 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 NDUFS7O75251 213 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 RPSAP08865 295 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 ZNF19P17023 458 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 SRP9P49458 86 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 TESK1Q15569 626 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 OR8G1Q15617 311 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 LIPNQ5VXI9 398 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 STX19Q8N4C7 294 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 RFLNBQ8N5W9 214 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 BPIFB6Q8NFQ5 453 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 OR8B12Q8NGG6 310 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 OR52I1Q8NGK6 324 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 RDH5Q92781 318 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 ELMOD3Q96FG2 381 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 Q96MF0 132 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 PIMREGQ9BSJ6 248 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 ABCB9Q9NP78 766 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 DLL4Q9NR61 685 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 CNOT2Q9NZN8 540 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 MRPL15Q9P015 296 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 NUFIP1Q9UHK0 495 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 MRM2Q9UI43 246 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 OR52A1Q9UKL2 312 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 RAB26Q9ULW5 256 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
SSBP3-208ENST00000444533 USF3Q68DE3 2245 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 ARID1AO14497 2285 aa12.03□□□□□ -0.48
SSBP3-208ENST00000444533 CREBBPQ92793 2442 aa12.02□□□□□ -0.48
SSBP3-208ENST00000444533 CCDC168Q8NDH2 2452 aa12.02□□□□□ -0.48
SSBP3-208ENST00000444533 GMDSO60547 372 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 IGHV1-46P01743 117 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 IGHA1P01876 353 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 HTR1AP08908 422 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ATP6V1B1P15313 513 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 MAP2K3P46734 347 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 GBX2P52951 348 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-208ENST00000444533 MRPS11P82912 194 aaKnown RBP12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF85Q03923 595 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SLC3A1Q07837 685 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 HFEQ30201 348 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 CDONQ4KMG0 1287 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 TP53I3Q53FA7 332 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SSX6Q7RTT6 188 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 PRSS45Q7RTY3 260 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
SSBP3-208ENST00000444533 LHFPL3Q86UP9 236 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 KLBQ86Z14 1044 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SYS1Q8N2H4 156 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF525Q8N782 197 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SPERTQ8NA61 448 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 OR56B2PQ8NGI1 322 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 OR8S1Q8NH09 359 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SGK3Q96BR1 496 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 C4orf36Q96KX1 117 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 HIST1H2AAQ96QV6 131 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 SIGLEC11Q96RL6 698 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF184Q99676 751 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 FGF20Q9NP95 211 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-208ENST00000444533 ERVK13-1Q9NX77 482 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 IL19Q9UHD0 177 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 TPRKBQ9Y3C4 175 aa12.02□□□□□ -0.49
SSBP3-208ENST00000444533 IGHV1-69-2A0A0G2JMI3 117 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 A0A1B0GVI7 797 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ZSCAN5BA6NJL1 495 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ANXA2P2A6NMY6 339 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 J3QRE1 110 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-208ENST00000444533 CD55P08174 381 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ADH4P08319 380 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 PIPP12273 146 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-208ENST00000444533 SLC25A16P16260 332 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF12P17014 697 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 MYF6P23409 242 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 MAGEB1P43366 347 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 GSK3AP49840 483 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 FAM3AP98173 230 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 KLHL36Q8N4N3 616 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 CCDC54Q8NEL0 328 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 SEMA6DQ8NFY4 1073 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 MYDGFQ969H8 173 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 CNBD2Q96M20 576 aa12.01□□□□□ -0.49
SSBP3-208ENST00000444533 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms