RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PRR23D2P0DMB1 279 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF12P17014 697 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 GATA4P43694 442 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 SRP9P49458 86 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ESRRGP62508 458 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 CDK5Q00535 292 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 TAF13Q15543 124 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF181Q2M3W8 571 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF404Q494X3 552 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 LIPNQ5VXI9 398 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM236Q5W0B7 351 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 DRAM2Q6UX65 266 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 MRPL21Q7Z2W9 205 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 WDR86Q86TI4 376 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ZDHHC13Q8IUH4 622 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ERI1Q8IV48 349 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 KLHL36Q8N4N3 616 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 SPICQ8N5J4 248 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 OR56B2PQ8NGI1 322 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 OR6N2Q8NGY6 317 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 SPTSSAQ969W0 71 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ZMYND19Q96E35 227 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 KCNJ15Q99712 375 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ADAT1Q9BUB4 502 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ABHD6Q9BV23 337 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 PAPOLBQ9NRJ5 636 aaKnown RBP9.09□□□□□ -0.95
SF3A1-203ENST00000444440 ENOPH1Q9UHY7 261 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 PCDHB10Q9UN67 800 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 INSIG2Q9Y5U4 225 aa9.09□□□□□ -0.95
SF3A1-203ENST00000444440 PPIAL4EA0A075B759 164 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PPIAL4CA0A0B4J2A2 164 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PPIAL4DF5H284 164 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 GLCEO94923 617 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PPIAL4FP0DN26 164 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 SLC2A5P22732 501 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 GSTT1P30711 240 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 CD80P33681 288 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 CX3CR1P49238 355 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 CRISP1P54107 249 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 HILS1P60008 231 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 ELF3P78545 371 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-203ENST00000444440 MALLQ13021 153 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF154Q13106 437 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PLBD1Q6P4A8 553 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 FAHD1Q6P587 224 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF826PQ6ZT77 177 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 KLBQ86Z14 1044 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 BCL6BQ8N143 479 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PARP8Q8N3A8 854 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 ZDHHC22Q8N966 263 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 Q8TCH9 128 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 SPRYD4Q8WW59 207 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-203ENST00000444440 SPSB4Q96A44 273 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 CENPNQ96H22 339 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-203ENST00000444440 RAB3IPQ96QF0 476 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-203ENST00000444440 OSBPL10Q9BXB5 764 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 PRRG3Q9BZD7 231 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 OR51V1Q9H2C8 321 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 KRT84Q9NSB2 600 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 DNAJC27Q9NZQ0 273 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
SF3A1-203ENST00000444440 GGT3PA6NGU5 568 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 PRR32B1ATL7 298 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 M0R129 80 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 PTBP3O95758 552 aaKnown RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 RPS2P15880 293 aaKnown RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 EGR1P18146 543 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 GATA3P23771 443 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 OPRL1P41146 370 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SLC15A1P46059 708 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 DAPP51397 102 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 HCCSP53701 268 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF121P58317 390 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 FAM3AP98173 230 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 OR8G1Q15617 311 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SNAPC1Q16533 368 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 ESCO2Q56NI9 601 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 ZFP1Q6P2D0 407 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SHFQ7M4L6 423 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SLC16A9Q7RTY1 509 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 AMIGO2Q86SJ2 522 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 CPOQ8IVL8 374 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 MUC20Q8N307 709 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 CELF2-AS1Q8N7Q2 184 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 NANPQ8TBE9 248 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 LRTOMTQ8WZ04 291 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SGK3Q96BR1 496 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 C1orf147Q96MC9 270 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 ZNF48Q96MX3 618 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 INTS14Q96SY0 518 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SSBP3Q9BWW4 388 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 FGF23Q9GZV9 251 aaPredicted RBP9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SP140LQ9H930 580 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 SLC25A19Q9HC21 320 aa9.07□□□□□ -0.96
SF3A1-203ENST00000444440 TVP23BQ9NYZ1 205 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms