RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 KRT36O76013 467 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 FABP3P05413 133 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 MMP9P14780 707 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 MUC1P15941 1255 aaPredicted RBP11.45□□□□□ -0.58
PTPRE-203ENST00000442830 CFL1P23528 166 aaKnown RBP11.45□□□□□ -0.58
PTPRE-203ENST00000442830 SLC15A1P46059 708 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 GSSP48637 474 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRE-203ENST00000442830 SF3A3Q12874 501 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRE-203ENST00000442830 TAF13Q15543 124 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 MPPED2Q15777 294 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 PRAMEF6Q5VXH4 476 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 LDLRAD3Q86YD5 345 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 FTMTQ8N4E7 242 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 PROKR2Q8NFJ6 384 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 CCT8L2Q96SF2 557 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 COPS4Q9BT78 406 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 CHIAQ9BZP6 476 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 RNPEPL1Q9HAU8 725 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 ADA2Q9NZK5 511 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 TGP01266 2768 aa11.45□□□□□ -0.58
PTPRE-203ENST00000442830 A0A0G2JK05 382 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 hCG_1807616A0A1W2PRN6 198 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 OR6C68A6NDL8 312 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 A6NLC8 198 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 ZNF878C9JN71 531 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 DIRAS1O95057 198 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 SEMG1P04279 462 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 HSD17B1P14061 328 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 OMGP23515 440 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 RBMXP38159 391 aaKnown RBP11.44□□□□□ -0.58
PTPRE-203ENST00000442830 GRB2P62993 217 aaKnown RBP11.44□□□□□ -0.58
PTPRE-203ENST00000442830 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 ZNF92Q03936 586 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 MICBQ29980 383 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 SPATS1Q496A3 300 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
PTPRE-203ENST00000442830 SLC36A1Q7Z2H8 476 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 KIR3DL3Q8N743 410 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 FAM86B1Q8N7N1 296 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 OR8S1Q8NH09 359 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 C12orf43Q96C57 262 aaKnown RBP11.44□□□□□ -0.58
PTPRE-203ENST00000442830 MAP6Q96JE9 813 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 NSMCE2Q96MF7 247 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 KCNJ15Q99712 375 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 SIRPDQ9H106 197 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 TOR3AQ9H497 397 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 ABCB9Q9NP78 766 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 IL1RAPQ9NPH3 570 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 MRPL22Q9NWU5 206 aaKnown RBP11.44□□□□□ -0.58
PTPRE-203ENST00000442830 C1orf123Q9NWV4 160 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 CTSZQ9UBR2 303 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 BAIAP2Q9UQB8 552 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 RNF114Q9Y508 228 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 CDH10Q9Y6N8 788 aa11.44□□□□□ -0.58
PTPRE-203ENST00000442830 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 SFTPBP07988 381 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 RRM2P31350 389 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 FMO3P31513 532 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 NAA10P41227 235 aaPredicted RBP11.43□□□□□ -0.58
PTPRE-203ENST00000442830 SNAI3Q3KNW1 292 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 TEX30Q5JUR7 227 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 SAMD4BQ5PRF9 694 aaKnown RBP11.43□□□□□ -0.58
PTPRE-203ENST00000442830 SFRP4Q6FHJ7 346 aaPredicted RBP11.43□□□□□ -0.58
PTPRE-203ENST00000442830 ZDHHC21Q8IVQ6 265 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 BOLLQ8N9W6 283 aaKnown RBP11.43□□□□□ -0.58
PTPRE-203ENST00000442830 UBE2FQ969M7 185 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 SPSB4Q96A44 273 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 MED4Q9NPJ6 270 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 NDE1Q9NXR1 346 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 FAM96BQ9Y3D0 163 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 NOTCH1P46531 2555 aa11.43□□□□□ -0.58
PTPRE-203ENST00000442830 CLPXO76031 633 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 FBP1P09467 338 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 ENTPD1P49961 510 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 PCK2Q16822 640 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 CDONQ4KMG0 1287 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 GLYATL3Q5SZD4 288 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 RUSC1-AS1Q66K80 236 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 BTN2A1Q7KYR7 527 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 RHOUQ7L0Q8 258 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 DCXRQ7Z4W1 244 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 NAA40Q86UY6 237 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 CYB561A3Q8NBI2 242 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 OR56B2PQ8NGI1 322 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 OR52H1Q8NGJ2 320 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 LHX4Q969G2 390 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 DNTTIP1Q9H147 329 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 FN3KQ9H479 309 aa11.42□□□□□ -0.58
PTPRE-203ENST00000442830 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms