RNA–Protein interactions for RNA: ENST00000441114.5

SHH-204, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-204ENST00000441114 SNRPGP62308 76 aaKnown RBP15.8■□□□□ 0.12
SHH-204ENST00000441114 POU4F2Q12837 409 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 OR8G1Q15617 311 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 SSX6Q7RTT6 188 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 ENTHD1Q8IYW4 607 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 OR10H4Q8NGA5 316 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 DVL3Q92997 716 aaPredicted RBP15.8■□□□□ 0.12
SHH-204ENST00000441114 MNTQ99583 582 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 YAE1D1Q9NRH1 226 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 GTF2A1LQ9UNN4 478 aa15.8■□□□□ 0.12
SHH-204ENST00000441114 TMEM269A0A1B0GVZ9 245 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 WNT9BO14905 357 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 ZNF254O75437 659 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 TACSTD2P09758 323 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 IGHV4-31P0DP07 118 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 IL2RGP31785 369 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 SRP9P49458 86 aaKnown RBP15.79■□□□□ 0.12
SHH-204ENST00000441114 FAM3AP98173 230 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 ROM1Q03395 351 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 TMED1Q13445 227 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 OCLNQ16625 522 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 MEDAGQ5VYS4 303 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 DEGS2Q6QHC5 323 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 PLEKHG7Q6ZR37 379 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 OR8B12Q8NGG6 310 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 CYGBQ8WWM9 190 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 SPSB4Q96A44 273 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 RNFT2Q96EX2 444 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 MEGF10Q96KG7 1140 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 OPA3Q9H6K4 179 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 DCAF16Q9NXF7 216 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHH-204ENST00000441114 PPP1R3CQ9UQK1 317 aa15.79■□□□□ 0.12
SHH-204ENST00000441114 A0A1W2PQL4 384 aaPredicted RBP15.78■□□□□ 0.12
SHH-204ENST00000441114 DLGAP1O14490 977 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 CD5LO43866 347 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 OR2T7P0C7T2 308 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 MTNR1AP48039 350 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 GSK3AP49840 483 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 CYB5R2Q6BCY4 276 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
SHH-204ENST00000441114 YIPF7Q8N8F6 280 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 OR2T27Q8NH04 317 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 CLDND2Q8NHS1 167 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 ZNF420Q8TAQ5 688 aaPredicted RBP15.78■□□□□ 0.12
SHH-204ENST00000441114 RAB1CQ92928 201 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 PPP1R14AQ96A00 147 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 TIMD4Q96H15 378 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 ADAT1Q9BUB4 502 aaKnown RBP15.78■□□□□ 0.12
SHH-204ENST00000441114 DCLRE1BQ9H816 532 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 FAM206AQ9NX38 181 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 WIPI2Q9Y4P8 454 aa15.78■□□□□ 0.12
SHH-204ENST00000441114 hCG_38984A0A1B0GV85 526 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 ISPDA4D126 451 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 ANKRD30BLA7E2S9 258 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 SLC16A6O15403 523 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 RPP14O95059 124 aaKnown RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 KRT8P05787 483 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 ZNF16P17020 682 aaPredicted RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 GABRB1P18505 474 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 CFL1P23528 166 aaKnown RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 GZMKP49863 264 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 IL5RAQ01344 420 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 EGR3Q06889 387 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 SLC3A1Q07837 685 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 MFGE8Q08431 387 aaPredicted RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 ZNF829Q3KNS6 432 aaPredicted RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 SLC25A30Q5SVS4 291 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 PEG10Q86TG7 708 aaKnown RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 MOGAT3Q86VF5 341 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 COMMD2Q86X83 199 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 LYZL4Q96KX0 146 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 RDH12Q96NR8 316 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 SOX7Q9BT81 388 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 PBOV1Q9GZY1 135 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 TMEM106BQ9NUM4 274 aa15.77■□□□□ 0.12
SHH-204ENST00000441114 NKX1-2Q9UD57 310 aaPredicted RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 MRM2Q9UI43 246 aaKnown RBP15.77■□□□□ 0.12
SHH-204ENST00000441114 SNTNA6NMZ2 147 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 MPZL2O60487 215 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 CLIC3O95833 236 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 PNPP00491 289 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 DCTDP32321 178 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 DDOSTP39656 456 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 MAB21L1Q13394 359 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 PRAMEF6Q5VXH4 476 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 PACRGLQ8N7B6 248 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 RHOXF1Q8NHV9 184 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 Q96MT0 163 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 SLC22A4Q9H015 551 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 RGCCQ9H4X1 137 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 GCM1Q9NP62 436 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 AMBNQ9NP70 447 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 C8orf4Q9NR00 106 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 UFSP2Q9NUQ7 469 aa15.76■□□□□ 0.11
SHH-204ENST00000441114 MRPL15Q9P015 296 aaKnown RBP15.76■□□□□ 0.11
SHH-204ENST00000441114 NOP16Q9Y3C1 178 aaKnown RBP15.76■□□□□ 0.11
SHH-204ENST00000441114 INAFM1C9JVW0 142 aa15.75■□□□□ 0.11
SHH-204ENST00000441114 LOC110117498-PIK3R3F6TDL0 507 aa15.75■□□□□ 0.11
SHH-204ENST00000441114 GMDSO60547 372 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms