RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MTNR1BP49286 362 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 PRRX1P54821 245 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 TLE1Q04724 770 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 TATDN3Q17R31 274 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 KRBOX4Q5JUW0 171 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 FAM198BQ6UWH4 519 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 Q6ZRG5 221 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 SIAEQ9HAT2 523 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 AMMECR1Q9Y4X0 333 aaPredicted RBP10.83□□□□□ -0.68
NEK1-201ENST00000439128 GPNMBQ14956 572 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 FAM74A1Q5RGS3 127 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 OR52N1Q8NH53 320 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 EDARADDQ8WWZ3 215 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 CYSLTR2Q9NS75 346 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 ASF1BQ9NVP2 202 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 SLC25A37Q9NYZ2 338 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 PSORS1C1Q9UIG5 152 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 TMEM30CPA0ZSE6 113 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 CASP3P42574 277 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 OSR2Q8N2R0 312 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 MALSU1Q96EH3 234 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 FAM157AC9JC47 383 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 ZNF205O95201 554 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 CEACAM3P40198 252 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 ACSM5Q6NUN0 579 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 OR2T35Q8NGX2 323 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 PELI1Q96FA3 418 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 C7orf50Q9BRJ6 194 aaKnown RBP10.83□□□□□ -0.68
NEK1-201ENST00000439128 H3BMH7 237 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 GPR6P46095 362 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 Q56UQ5 140 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 NUFIP2Q7Z417 695 aaKnown RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 PRSS35Q8N3Z0 413 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 TMEM104Q8NE00 496 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 DNASE2BQ8WZ79 361 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 ZNF501Q96CX3 271 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 MCM3APO60318 1980 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 ATF1P18846 271 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 SLC38A9Q8NBW4 561 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 MZB1Q8WU39 189 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 CXXC4Q9H2H0 198 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 LY75O60449 1722 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 K7EPK0 472 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 OR5G3P0C626 314 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 HABP2Q14520 560 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 MRGPRGQ86SM5 289 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 CCDC71Q8IV32 467 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 FAM71E2Q8N5Q1 922 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 HMGCLL1Q8TB92 370 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 FRZBQ92765 325 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 BCL7BQ9BQE9 202 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 OR2B2Q9GZK3 357 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 GAL3ST2Q9H3Q3 398 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 HAX1O00165 279 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 SCG5P05408 212 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 PRDX4Q13162 271 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 KLHDC8BQ8IXV7 354 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 CNTRLQ7Z7A1 2325 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 DEFB108AA8MXU0 73 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 DVL1O14640 695 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 IL7P13232 177 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 SERPINF1P36955 418 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 ECI1P42126 302 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 DVL1P1P54792 670 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 RAE1P78406 368 aaKnown RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 MRPS34P82930 218 aaKnown RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 BEX5Q5H9J7 111 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 LYPD4Q6UWN0 246 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 ABHD3Q8WU67 409 aa10.82□□□□□ -0.68
NEK1-201ENST00000439128 GMPPAQ96IJ6 420 aaPredicted RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 DNAJB12Q9NXW2 375 aaKnown RBP10.82□□□□□ -0.68
NEK1-201ENST00000439128 KNL1Q8NG31 2342 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 RER1O15258 196 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 PRPH2P23942 346 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 ALDH3B2P48448 385 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 DLX5P56178 289 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 OR10A3P58181 314 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 SLC35A2P78381 396 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 ZNF425Q6IV72 752 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 TXNL4BQ9NX01 149 aaKnown RBP10.81□□□□□ -0.68
NEK1-201ENST00000439128 FOXJ2Q9P0K8 574 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 FBXL2Q9UKC9 423 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 SDCBPO00560 298 aaPredicted RBP10.81□□□□□ -0.68
NEK1-201ENST00000439128 ST8SIA5O15466 376 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 CELA2AP08217 269 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 DUSP1P28562 367 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 GDNFP39905 211 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 ASCL1P50553 236 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 CLINT1Q14677 625 aa10.81□□□□□ -0.68
NEK1-201ENST00000439128 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
NEK1-201ENST00000439128 THNSL2Q86YJ6 484 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms