RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 APOBEC3DQ96AK3 386 aaPredicted RBP8.48□□□□□ -1.05
RTN4-211ENST00000438462 DUSP26Q9BV47 211 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 DNTTIP1Q9H147 329 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 SMURF2Q9HAU4 748 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 USE1Q9NZ43 259 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 ADA2Q9NZK5 511 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 VSX1Q9NZR4 365 aaPredicted RBP8.48□□□□□ -1.05
RTN4-211ENST00000438462 MOB4Q9Y3A3 225 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 NOP16Q9Y3C1 178 aaKnown RBP8.48□□□□□ -1.05
RTN4-211ENST00000438462 HSPE1-MOB4S4R3N1 261 aa8.48□□□□□ -1.05
RTN4-211ENST00000438462 hCG_1809904A0A1W2PP81 198 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 A0A1W2PPE2 198 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 A0A1W2PPL8 197 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 A0A1W2PR64 198 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 A0A1W2PRV1 198 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 C12orf71A8MTZ7 269 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 CENPBD1B2RD01 187 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 SIGLEC5O15389 551 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 MBD3O95983 291 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 ACADSP16219 412 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 KIR3DL2P43630 455 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 SLURP1P55000 103 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 GNB1P62873 340 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 TNFRSF9Q07011 255 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 CD47Q08722 323 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 SCRN3Q0VDG4 424 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 FOXE3Q13461 319 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 GPR50Q13585 617 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 PNLIPRP3Q17RR3 467 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 GALNTL6Q49A17 601 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 Q5VSD8 79 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 C3orf62Q6ZUJ4 267 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 SLC35E3Q7Z769 313 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 FOXRED2Q8IWF2 684 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 TMEM151AQ8N4L1 468 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 KRTCAP2Q8N6L1 136 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 ZNF454Q8N9F8 522 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 OR4A15Q8NGL6 344 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 OR13D1Q8NGV5 346 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 STMN2Q93045 179 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 NMD3Q96D46 503 aaKnown RBP8.47□□□□□ -1.05
RTN4-211ENST00000438462 MED30Q96HR3 178 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 MPP4Q96JB8 637 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 OVOL2Q9BRP0 275 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 GNB4Q9HAV0 340 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 TBC1D23Q9NUY8 699 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 ING3Q9NXR8 418 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 LRP12Q9Y561 859 aa8.47□□□□□ -1.05
RTN4-211ENST00000438462 A0A1W2PPH5 198 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 SHISA3A0PJX4 238 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 MT-ATP6P00846 226 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 IGLV1-51P01701 117 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.06
RTN4-211ENST00000438462 IMPDH1P20839 514 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 HTR2AP28223 471 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 MRGPRG-AS1Q2M3A8 158 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 MINOS1Q5TGZ0 78 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 CYS1Q717R9 158 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 SPRYD4Q8WW59 207 aaPredicted RBP8.46□□□□□ -1.06
RTN4-211ENST00000438462 TMEM106AQ96A25 262 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 OR5B12Q96R08 314 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 SLC22A4Q9H015 551 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 TXNIPQ9H3M7 391 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 GSTO2Q9H4Y5 243 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 RNPEPL1Q9HAU8 725 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 EMC7Q9NPA0 242 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 MARCOQ9UEW3 520 aaPredicted RBP8.46□□□□□ -1.06
RTN4-211ENST00000438462 TMED5Q9Y3A6 229 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 MINOS1-NBL1R4GNA1 71 aa8.46□□□□□ -1.06
RTN4-211ENST00000438462 I3L521 148 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 GMDSO60547 372 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 NDUFB8O95169 186 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 ELANEP08246 267 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 NR2F1P10589 423 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 ZNF823P16415 610 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 MSR1P21757 451 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 BRS3P32247 399 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 CHI3L1P36222 383 aaPredicted RBP8.45□□□□□ -1.06
RTN4-211ENST00000438462 ISL1P61371 349 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 CSNK2BP67870 215 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 PITPNAQ00169 270 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 IL18R1Q13478 541 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 GK2Q14410 553 aaPredicted RBP8.45□□□□□ -1.06
RTN4-211ENST00000438462 ZNF273Q14593 569 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 TMEM200BQ69YZ2 307 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 SLC25A47Q6Q0C1 308 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 WDR82Q6UXN9 313 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 LRRC34Q8IZ02 419 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 ZNRF1Q8ND25 227 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 HDAC2Q92769 488 aaKnown RBP8.45□□□□□ -1.06
RTN4-211ENST00000438462 WDR89Q96FK6 387 aaPredicted RBP8.45□□□□□ -1.06
RTN4-211ENST00000438462 THAP7Q9BT49 309 aaPredicted RBP8.45□□□□□ -1.06
RTN4-211ENST00000438462 RSRP1Q9BUV0 290 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 NUF2Q9BZD4 464 aa8.45□□□□□ -1.06
RTN4-211ENST00000438462 KRCC1Q9NPI7 259 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms