RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TMIGD3P0DMS9 266 aaPredicted RBP18.45■□□□□ 0.54
PTPRF-207ENST00000436724 SRP9P49458 86 aaKnown RBP18.45■□□□□ 0.54
PTPRF-207ENST00000436724 GZMKP49863 264 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 BTG1P62324 171 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 RNASE12Q5GAN4 147 aaKnown RBP18.45■□□□□ 0.54
PTPRF-207ENST00000436724 GLYATL3Q5SZD4 288 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 SIAH3Q8IW03 269 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 GCNT2Q8N0V5 402 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 OR13C9Q8NGT0 318 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 SPTSSAQ969W0 71 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 TIMM10BQ9Y5J6 103 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 RPL36A-HNRNPH2H7BZ11 118 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 SLC17A2O00624 439 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 MMP7P09237 267 aaPredicted RBP18.45■□□□□ 0.54
PTPRF-207ENST00000436724 ERP29P30040 261 aaKnown RBP18.45■□□□□ 0.54
PTPRF-207ENST00000436724 HTR5AP47898 357 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 DMRTC1Q5HYR2 192 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 FAM166AQ6J272 317 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 MTFR2Q6P444 385 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 JAGN1Q8N5M9 183 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 TRIB1Q96RU8 372 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 SLA2Q9H6Q3 261 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 MCUBQ9NWR8 336 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 CACNG2Q9Y698 323 aa18.45■□□□□ 0.54
PTPRF-207ENST00000436724 FARS2O95363 451 aaKnown RBP18.44■□□□□ 0.54
PTPRF-207ENST00000436724 EFNB2P52799 333 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 GLT8D1Q68CQ7 371 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 P4HA3Q7Z4N8 544 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 GCDHQ92947 438 aaPredicted RBP18.44■□□□□ 0.54
PTPRF-207ENST00000436724 PIEZO2Q9H5I5 2752 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 ZNF503-AS2A6NEH8 195 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 OR6C6A6NF89 314 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 AQP7O14520 342 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 C1QBP02746 253 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 CCL1P22362 96 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 POU3F4P49335 361 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 RAB11BQ15907 218 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 C6orf183Q5T699 404 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 Q6ZS92 163 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 ADGRE4PQ86SQ3 457 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 RBMXL3Q8N7X1 1067 aaKnown RBP18.44■□□□□ 0.54
PTPRF-207ENST00000436724 OR52N4Q8NGI2 321 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 FAM3DQ96BQ1 224 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 CLCF1Q9UBD9 225 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 SSUH2Q9Y2M2 353 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 ZNF175Q9Y473 711 aa18.44■□□□□ 0.54
PTPRF-207ENST00000436724 OR6C65A6NJZ3 312 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 TTLL8A6PVC2 850 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 TMEM127O75204 238 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 UBL3O95164 117 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 HLA-HP01893 362 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 ZNF20P17024 532 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 CFPP27918 469 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 C2orf76Q3KRA6 126 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 PABPC1L2AQ5JQF8 200 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 RNF144BQ7Z419 303 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 CPEB3Q8NE35 698 aaKnown RBP18.43■□□□□ 0.54
PTPRF-207ENST00000436724 OR1M1Q8NGA1 313 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 OR5D14Q8NGL3 314 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 ZFAND1Q8TCF1 268 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 YIPF5Q969M3 257 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 SLC25A28Q96A46 364 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 CMTM3Q96MX0 182 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 MRI1Q9BV20 369 aa18.43■□□□□ 0.54
PTPRF-207ENST00000436724 IGLV3-1P01715 115 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 HTR2CP28335 458 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 ART1P52961 327 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 PRSS12P56730 875 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 PCBD1P61457 104 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 DOK3Q7L591 496 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 OR14K1Q8NGZ2 314 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 OR2AE1Q8NHA4 323 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 AKAP1Q92667 903 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPRF-207ENST00000436724 SPACA5Q96QH8 159 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 PLSCR2Q9NRY7 297 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 ING3Q9NXR8 418 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 MYEF2Q9P2K5 600 aaKnown RBP18.42■□□□□ 0.54
PTPRF-207ENST00000436724 ETV7Q9Y603 341 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 MAP1BP46821 2468 aaKnown RBP18.42■□□□□ 0.54
PTPRF-207ENST00000436724 A0A0A6YYJ9 748 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 PTHLHP12272 177 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 FCGR2AP12318 317 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 BDKRB2P30411 391 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 DGCR2P98153 550 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 TNK1Q13470 666 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 NRN1LQ496H8 165 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 HACD4Q5VWC8 232 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 KRT74Q7RTS7 529 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 BIVMQ86UB2 503 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 LYPD6Q86Y78 171 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 OR4D6Q8NGJ1 314 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 PLEKHA1Q9HB21 404 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 MSRB2Q9Y3D2 182 aa18.42■□□□□ 0.54
PTPRF-207ENST00000436724 A0A0U1RQV5 110 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 MEGF11A6BM72 1044 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 SMLR1H3BR10 107 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 DLL1O00548 723 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 CD3GP09693 182 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 CD37P11049 281 aa18.41■□□□□ 0.54
PTPRF-207ENST00000436724 CDK2P24941 298 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms