RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ACTL6AO96019 429 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CD37P11049 281 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 PSG4Q00888 419 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 KLF9Q13886 244 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-203ENST00000431146 RAB35Q15286 201 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 DOK3Q7L591 496 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 FCAMRQ8WWV6 532 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 SPTSSAQ969W0 71 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 WDYHV1Q96HA8 205 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 SORCS2Q96PQ0 1159 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 ZDHHC11Q9H8X9 412 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 SLC17A5Q9NRA2 495 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 EMC3Q9P0I2 261 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 DMXL2Q8TDJ6 3036 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 MED12LQ86YW9 2145 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 TRAV18A0A075B6X5 111 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 A0A096LPE4 126 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 A0A1W2PPZ6 126 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CIB4A0PJX0 185 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 A8MV72 311 aaPredicted RBP14.59□□□□□ -0.07
USHBP1-203ENST00000431146 EFSO43281 561 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 TGM6O95932 706 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 FCER2P06734 321 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CTRB1P17538 263 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CCL1P22362 96 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CCR6P51684 374 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 RTP5Q14D33 572 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 TATDN3Q17R31 274 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 PLA1AQ53H76 456 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 C1orf100Q5SVJ3 147 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 CTRB2Q6GPI1 263 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 NUFIP2Q7Z417 695 aaKnown RBP14.59□□□□□ -0.07
USHBP1-203ENST00000431146 OR14K1Q8NGZ2 314 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 OR2AE1Q8NHA4 323 aa14.59□□□□□ -0.07
USHBP1-203ENST00000431146 TRAV6A0A075B6T7 132 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 CRYGSP22914 178 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 GIFP27352 417 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 HTR5AP47898 357 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 GUCA2AQ02747 115 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 TMEM255AQ5JRV8 349 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 HACD4Q5VWC8 232 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF529Q6P280 563 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 OR5AS1Q8N127 324 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 LINC00469Q8N7U9 141 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 OR1F12Q8NHA8 337 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 NPRL2Q8WTW4 380 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 FAM46BQ96A09 425 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 PHF21AQ96BD5 680 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 WNT5BQ9H1J7 359 aa14.58□□□□□ -0.08
USHBP1-203ENST00000431146 MEIS3P1A6NDR6 274 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF891A8MT65 544 aaPredicted RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 SULT1B1O43704 296 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ARF1P84077 181 aaKnown RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 SCRN3Q0VDG4 424 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 FAAP20Q6NZ36 180 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 UTS2BQ765I0 119 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ADGRE4PQ86SQ3 457 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 MCEMP1Q8IX19 187 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 AIFM2Q9BRQ8 373 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 MARVELD1Q9BSK0 173 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 OR2H1Q9GZK4 316 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 C12orf49Q9H741 205 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 BCO1Q9HAY6 547 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 DIABLOQ9NR28 239 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 PARPBPQ9NWS1 579 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ALG5Q9Y673 324 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 KCNMB2Q9Y691 235 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 SVILO95425 2214 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 CENPXA8MT69 81 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 CCNKO75909 580 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 IGLV3-1P01715 115 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 YES1P07947 543 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 FAHP16930 419 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF93P35789 620 aaPredicted RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 SNTB2Q13425 540 aaKnown RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 MOGAT2Q3SYC2 334 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 IGFL2Q6UWQ7 119 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF627Q7L945 461 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 FOXRED1Q96CU9 486 aaPredicted RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 RNF170Q96K19 258 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 METTL17Q9H7H0 456 aaPredicted RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 ZMAT3Q9HA38 289 aaKnown RBP14.57□□□□□ -0.08
USHBP1-203ENST00000431146 NUDT15Q9NV35 164 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 TIMM10BQ9Y5J6 103 aa14.57□□□□□ -0.08
USHBP1-203ENST00000431146 IGKV1-9A0A0C4DH69 117 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 A0A0U1RQV5 110 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 INMT-MINDY4F8WBC2 141 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 LDLRAD4O15165 306 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 GMDSO60547 372 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 HCKP08631 526 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 SPINK2P20155 84 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 B2MP61769 119 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 SFRP4Q6FHJ7 346 aaPredicted RBP14.56□□□□□ -0.08
USHBP1-203ENST00000431146 APH1AQ96BI3 265 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 DHRS9Q9BPW9 319 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 UQCC2Q9BRT2 126 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 ELF5Q9UKW6 265 aaPredicted RBP14.56□□□□□ -0.08
USHBP1-203ENST00000431146 RBMX2Q9Y388 322 aaKnown RBP14.56□□□□□ -0.08
USHBP1-203ENST00000431146 DSPP15924 2871 aaKnown RBP14.56□□□□□ -0.08
USHBP1-203ENST00000431146 OR6C6A6NF89 314 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms