RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 NDE1Q9NXR1 346 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
PTPRA-206ENST00000430705 U3KQV3 271 aa13.52□□□□□ -0.25
PTPRA-206ENST00000430705 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 DHRS12A0PJE2 317 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 TMPRSS2O15393 492 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 WIPF1O43516 503 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 SFTPBP07988 381 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 IRF2P14316 349 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 MMP9P14780 707 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 MXRA7P84157 204 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 KLHL12Q53G59 568 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 TEX30Q5JUR7 227 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 RUSC1-AS1Q66K80 236 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 SFRP4Q6FHJ7 346 aaPredicted RBP13.51□□□□□ -0.25
PTPRA-206ENST00000430705 SPATC1Q76KD6 591 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 NLRC3Q7RTR2 1065 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 PRSS45Q7RTY3 260 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 LINC00471Q8N535 108 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 GCSAMQ8N6F7 178 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 OR11L1Q8NGX0 322 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 PLEKHA8Q96JA3 519 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 NIPSNAP1Q9BPW8 284 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 MED20Q9H944 212 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 RNF7Q9UBF6 113 aa13.51□□□□□ -0.25
PTPRA-206ENST00000430705 GGT3PA6NGU5 568 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 ZNF878C9JN71 531 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 C3orf80F5H4A9 247 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 LGALS8O00214 317 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 ZNF593O00488 134 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-206ENST00000430705 GMDSO60547 372 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 T-ENOLP0DO92 83 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
PTPRA-206ENST00000430705 FOXL1Q12952 345 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 MICAQ29983 383 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 DEFB112Q30KQ8 113 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 OR2T5Q6IEZ7 315 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 FAM90A1Q86YD7 464 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 C11orf53Q8IXP5 236 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 FGFRL1Q8N441 504 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 BOLLQ8N9W6 283 aaKnown RBP13.5□□□□□ -0.25
PTPRA-206ENST00000430705 OR2T33Q8NG76 320 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 OR2T29Q8NH02 315 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 SGMS2Q8NHU3 365 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 TBX15Q96SF7 602 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 SLC22A4Q9H015 551 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 PRDM13Q9H4Q3 707 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 FN3KRPQ9HA64 309 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 CENPMQ9NSP4 180 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 C1orf123Q9NWV4 160 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 ZNF319Q9P2F9 582 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 SAMHD1Q9Y3Z3 626 aaKnown RBP13.5□□□□□ -0.25
PTPRA-206ENST00000430705 VWFP04275 2813 aa13.5□□□□□ -0.25
PTPRA-206ENST00000430705 A0A1B0GW55 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 FAM183AA6NL82 134 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 B2RBV5 119 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 LHBP01229 141 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L2P0CJ85 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L3P0CJ86 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L4P0CJ87 422 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L5P0CJ88 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L6P0CJ89 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L7P0CJ90 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 FMO3P31513 532 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 CFHR2P36980 270 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 CX3CR1P49238 355 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 FAM3AP98173 230 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 PRR31Q5SQ13 230 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4L9Q6RFH8 374 aaPredicted RBP13.49□□□□□ -0.25
PTPRA-206ENST00000430705 TMEM179BQ7Z7N9 219 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 OR6K6Q8NGW6 343 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 CLPTM1LQ96KA5 538 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 RASSF4Q9H2L5 321 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 MMADHCQ9H3L0 296 aaPredicted RBP13.49□□□□□ -0.25
PTPRA-206ENST00000430705 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 UNKLQ9H9P5 680 aaKnown RBP13.49□□□□□ -0.25
PTPRA-206ENST00000430705 CMC2Q9NRP2 79 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 DUX4Q9UBX2 424 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 N6AMT1Q9Y5N5 214 aa13.49□□□□□ -0.25
PTPRA-206ENST00000430705 IGHV3OR15-7A0A075B7D8 119 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 hCG_38984A0A1B0GV85 526 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 OOEPA6NGQ2 149 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-206ENST00000430705 HOXA3O43365 443 aaPredicted RBP13.48□□□□□ -0.25
PTPRA-206ENST00000430705 ENSAO43768 121 aaKnown RBP13.48□□□□□ -0.25
PTPRA-206ENST00000430705 GYPAP02724 150 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 TRIM25Q14258 630 aaKnown RBP13.48□□□□□ -0.25
PTPRA-206ENST00000430705 CD300LDQ6UXZ3 194 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 DHFR2Q86XF0 187 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 PLPP7Q8NBV4 271 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 OR10G2Q8NGC3 310 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 RNF133Q8WVZ7 376 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 SLC25A28Q96A46 364 aa13.48□□□□□ -0.25
PTPRA-206ENST00000430705 SGK3Q96BR1 496 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms